Lachnospiraceae bacterium KM106-2: lbkm_1255
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Entry
lbkm_1255 CDS
T08927
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx03030
DNA replication
lbx03410
Base excision repair
lbx03420
Nucleotide excision repair
lbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lbkm_1255
03410 Base excision repair
lbkm_1255
03420 Nucleotide excision repair
lbkm_1255
03440 Homologous recombination
lbkm_1255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbx03032
]
lbkm_1255
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_1255
Enzymes [BR:
lbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lbkm_1255
DNA replication proteins [BR:
lbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
lbkm_1255
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
lbkm_1255
NER (nucleotide excision repair)
GGR (global genome repair) factors
lbkm_1255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BBF42572
UniProt:
A0A7U6QIV6
LinkDB
All DBs
Position
complement(1298706..1301366)
Genome browser
AA seq
886 aa
AA seq
DB search
MSKKIVLIDGHSILNRAFYGIPDLTNSEGLHTNAVYGFLNILLKILEEEQADYLTVAFDV
KAPTFRHEMYDAYKGTRKGMPEELREQVPLMKEVLKAMHVTIVERPGYEADDILGTIARQ
AERDGLDVSLVSGDRDLLQLATEKIKIRIPKTKRGGTEIEDYHTQDVIDKYGVTPLQIID
LKGLMGDQSDNIPGVPGIGEKTATKILTQFETVENAIEHVDEIKPNKAKENLKEYEDMAR
MSKTLATIKTDCELDYNRDEATFDELFNEEAFVMFKRLEFKNLLNRFDQEASVSNTFEES
FVLTSDFAKADQILSEAKETITTKKVSHIGISFLYEKEEILGLTICYGEEKAATILVGGM
ITKEYLVDHMNAFIQMEGTLSIIGLKDQLRFMDACENSPFFDCSVVAYLLNPLKDSYFYD
DLARDYLSIPLRSTQELFGKKKLSEVASEENDEFRLYGGYVSYVAFKAYEPLMDALKETE
MLDLFHDIEMPLVYTLWDMERRGIRVNKEALKQYGDQLSGRINELETGIYDLVGEQFNIN
SPKQLGVILFEKLELPFAKKTKTGYSTSADILEKLKCEHPVISMILEYRQLTKLKSTYAD
GLANYIHEDDSRIHGKFNQTITATGRISSTEPNLQNIPIRMELGRQIRKVFIPKDGYVFL
DADYSQIELRVLAHMSGDERLIAAYHEDEDIHRITASQVFHTPLNEVTSLQRSNAKAVNF
GIIYGISSFSLGQDLGITKKDADHYIKRYFETYPKVKGFLENLVSDAKEKGYVTTLYHRR
RPIPELASSNFMQRAFGERIAMNSPIQGTAADIIKIAMIRVNKRLKEANMKSQLLLQIHD
ELLVETHESEIEQVKQIMLEEMQGVSSLAVPLEIEVMQGNNWYESK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaaatagttttaattgatggacatagtattttgaatcgagctttctacgga
atccctgatctgacaaattccgaaggccttcataccaatgcagtctatgggtttttaaac
atacttcttaaaatactggaagaagagcaggcagattatttaacggttgcctttgatgtg
aaagcaccaacattccgtcatgagatgtacgatgcgtacaaaggaactagaaaaggcatg
ccagaagaattaagagagcaagtacctcttatgaaagaagtgcttaaggcaatgcatgtg
acgatcgtagaacgtccgggttacgaagcagatgatattttaggaaccattgctcgtcag
gcagaacgagatggtttggatgtctctttagtgtctggagatcgcgatttattacagctt
gcgactgaaaaaattaaaattcgtattcctaagactaaacgtggtggaacggaaatcgaa
gattatcatacacaggatgttatcgacaaatacggcgtaacaccacttcagatcatcgac
ttaaaaggtctaatgggtgatcaatcggataatattccaggcgttcctggaattggggag
aagacagcaactaagatcttaactcaatttgaaacggttgagaatgccattgaacatgta
gatgagatcaagccaaacaaggcgaaagagaatttaaaagaatatgaagatatggcgaga
atgagtaagacattagccacgatcaagaccgattgcgaacttgactataatcgtgatgaa
gccacatttgatgagctattcaatgaggaagcttttgttatgtttaaacgtcttgaattc
aaaaatttattaaatcgttttgatcaggaagcttccgtatcaaatacgtttgaggaatcc
tttgtattgacttctgattttgctaaagcagatcagatcctcagtgaagcaaaagaaaca
attacaacgaagaaagtgtcccatatcggtatttccttcctttatgaaaaagaagagatt
ttaggtttgacgatctgttatggagaagagaaagcagcaacaattttagttggtggaatg
atcacaaaagaataccttgtagatcatatgaacgctttcattcagatggaaggaacctta
agcattatcggattaaaggatcaattacgctttatggatgcatgcgaaaatagcccattt
tttgactgctcagttgttgcatatctactaaatccattaaaagattcttatttctacgat
gatttagcaagagattatctttcaattccattacgttcgacacaagagttatttggcaaa
aagaaattatcagaagtagccagtgaagaaaatgatgaattccgtttatatggcggttat
gtatcctatgtggcatttaaagcttatgaaccattaatggatgccttaaaagagactgag
atgttagatttattccacgatatcgagatgccattagtttacaccttatgggatatggaa
cgtcgcggaattcgtgtaaataaagaagccttaaagcaatacggagatcagttgagtgga
cgtatcaacgaattagaaactggaatctatgatctcgttggtgaacaatttaatatcaat
tcaccaaaacagcttggtgtcattttatttgaaaagttagaacttccatttgcgaagaag
acaaagaccggatattctacttccgcagatattcttgaaaaattaaaatgcgaacatcct
gttatttccatgattctagaatatcgtcaattaacgaaattgaaatcgacctatgccgat
ggacttgctaactacatccacgaagatgatagtagaattcatggcaaatttaatcagacg
atcacagcaacaggaagaatcagctcgacggaaccaaatcttcaaaatattccgattcgt
atggaacttggaagacagatccgtaaggtctttattccaaaagacggttatgtgttccta
gatgccgattattcccagatcgaacttcgtgtacttgcgcatatgtcaggcgacgaacga
ttgatcgctgcttaccatgaagacgaagatattcatagaattacagcaagtcaggtattc
catacaccattaaacgaagttaccagtttacaacgtagtaacgcaaaagcagttaacttt
ggtattatctatggaatcagttcctttagtttaggacaagatcttggaattacaaagaag
gatgccgatcattatatcaaacgttattttgaaacatatccaaaggtaaaaggattctta
gaaaatcttgtttcagatgccaaagagaaaggttatgttaccacgttatatcatagaaga
agaccaattcctgaattagcatccagcaatttcatgcaacgtgcgtttggcgaacgaatc
gctatgaactcaccaattcagggaacggcagcagatattatcaagattgcaatgatccgt
gtaaataaacgattaaaagaagcaaatatgaaatcacaattattgcttcagatccacgat
gaattattagtcgagacacatgaatctgaaattgaacaagtcaaacagatcatgttagaa
gagatgcaaggggtatcttccttagcagtacctcttgagattgaagtaatgcagggaaat
aactggtacgaatctaaatag
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