KEGG   Lachnospiraceae bacterium KM106-2: lbkm_1255
Entry
lbkm_1255         CDS       T08927                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lbx  Lachnospiraceae bacterium KM106-2
Pathway
lbx03030  DNA replication
lbx03410  Base excision repair
lbx03420  Nucleotide excision repair
lbx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    lbkm_1255
   03410 Base excision repair
    lbkm_1255
   03420 Nucleotide excision repair
    lbkm_1255
   03440 Homologous recombination
    lbkm_1255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbx03032]
    lbkm_1255
   03400 DNA repair and recombination proteins [BR:lbx03400]
    lbkm_1255
Enzymes [BR:lbx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     lbkm_1255
DNA replication proteins [BR:lbx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     lbkm_1255
DNA repair and recombination proteins [BR:lbx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     lbkm_1255
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     lbkm_1255
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH HHH_2
Other DBs
NCBI-ProteinID: BBF42572
UniProt: A0A7U6QIV6
LinkDB
Position
complement(1298706..1301366)
AA seq 886 aa
MSKKIVLIDGHSILNRAFYGIPDLTNSEGLHTNAVYGFLNILLKILEEEQADYLTVAFDV
KAPTFRHEMYDAYKGTRKGMPEELREQVPLMKEVLKAMHVTIVERPGYEADDILGTIARQ
AERDGLDVSLVSGDRDLLQLATEKIKIRIPKTKRGGTEIEDYHTQDVIDKYGVTPLQIID
LKGLMGDQSDNIPGVPGIGEKTATKILTQFETVENAIEHVDEIKPNKAKENLKEYEDMAR
MSKTLATIKTDCELDYNRDEATFDELFNEEAFVMFKRLEFKNLLNRFDQEASVSNTFEES
FVLTSDFAKADQILSEAKETITTKKVSHIGISFLYEKEEILGLTICYGEEKAATILVGGM
ITKEYLVDHMNAFIQMEGTLSIIGLKDQLRFMDACENSPFFDCSVVAYLLNPLKDSYFYD
DLARDYLSIPLRSTQELFGKKKLSEVASEENDEFRLYGGYVSYVAFKAYEPLMDALKETE
MLDLFHDIEMPLVYTLWDMERRGIRVNKEALKQYGDQLSGRINELETGIYDLVGEQFNIN
SPKQLGVILFEKLELPFAKKTKTGYSTSADILEKLKCEHPVISMILEYRQLTKLKSTYAD
GLANYIHEDDSRIHGKFNQTITATGRISSTEPNLQNIPIRMELGRQIRKVFIPKDGYVFL
DADYSQIELRVLAHMSGDERLIAAYHEDEDIHRITASQVFHTPLNEVTSLQRSNAKAVNF
GIIYGISSFSLGQDLGITKKDADHYIKRYFETYPKVKGFLENLVSDAKEKGYVTTLYHRR
RPIPELASSNFMQRAFGERIAMNSPIQGTAADIIKIAMIRVNKRLKEANMKSQLLLQIHD
ELLVETHESEIEQVKQIMLEEMQGVSSLAVPLEIEVMQGNNWYESK
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgagtaagaaaatagttttaattgatggacatagtattttgaatcgagctttctacgga
atccctgatctgacaaattccgaaggccttcataccaatgcagtctatgggtttttaaac
atacttcttaaaatactggaagaagagcaggcagattatttaacggttgcctttgatgtg
aaagcaccaacattccgtcatgagatgtacgatgcgtacaaaggaactagaaaaggcatg
ccagaagaattaagagagcaagtacctcttatgaaagaagtgcttaaggcaatgcatgtg
acgatcgtagaacgtccgggttacgaagcagatgatattttaggaaccattgctcgtcag
gcagaacgagatggtttggatgtctctttagtgtctggagatcgcgatttattacagctt
gcgactgaaaaaattaaaattcgtattcctaagactaaacgtggtggaacggaaatcgaa
gattatcatacacaggatgttatcgacaaatacggcgtaacaccacttcagatcatcgac
ttaaaaggtctaatgggtgatcaatcggataatattccaggcgttcctggaattggggag
aagacagcaactaagatcttaactcaatttgaaacggttgagaatgccattgaacatgta
gatgagatcaagccaaacaaggcgaaagagaatttaaaagaatatgaagatatggcgaga
atgagtaagacattagccacgatcaagaccgattgcgaacttgactataatcgtgatgaa
gccacatttgatgagctattcaatgaggaagcttttgttatgtttaaacgtcttgaattc
aaaaatttattaaatcgttttgatcaggaagcttccgtatcaaatacgtttgaggaatcc
tttgtattgacttctgattttgctaaagcagatcagatcctcagtgaagcaaaagaaaca
attacaacgaagaaagtgtcccatatcggtatttccttcctttatgaaaaagaagagatt
ttaggtttgacgatctgttatggagaagagaaagcagcaacaattttagttggtggaatg
atcacaaaagaataccttgtagatcatatgaacgctttcattcagatggaaggaacctta
agcattatcggattaaaggatcaattacgctttatggatgcatgcgaaaatagcccattt
tttgactgctcagttgttgcatatctactaaatccattaaaagattcttatttctacgat
gatttagcaagagattatctttcaattccattacgttcgacacaagagttatttggcaaa
aagaaattatcagaagtagccagtgaagaaaatgatgaattccgtttatatggcggttat
gtatcctatgtggcatttaaagcttatgaaccattaatggatgccttaaaagagactgag
atgttagatttattccacgatatcgagatgccattagtttacaccttatgggatatggaa
cgtcgcggaattcgtgtaaataaagaagccttaaagcaatacggagatcagttgagtgga
cgtatcaacgaattagaaactggaatctatgatctcgttggtgaacaatttaatatcaat
tcaccaaaacagcttggtgtcattttatttgaaaagttagaacttccatttgcgaagaag
acaaagaccggatattctacttccgcagatattcttgaaaaattaaaatgcgaacatcct
gttatttccatgattctagaatatcgtcaattaacgaaattgaaatcgacctatgccgat
ggacttgctaactacatccacgaagatgatagtagaattcatggcaaatttaatcagacg
atcacagcaacaggaagaatcagctcgacggaaccaaatcttcaaaatattccgattcgt
atggaacttggaagacagatccgtaaggtctttattccaaaagacggttatgtgttccta
gatgccgattattcccagatcgaacttcgtgtacttgcgcatatgtcaggcgacgaacga
ttgatcgctgcttaccatgaagacgaagatattcatagaattacagcaagtcaggtattc
catacaccattaaacgaagttaccagtttacaacgtagtaacgcaaaagcagttaacttt
ggtattatctatggaatcagttcctttagtttaggacaagatcttggaattacaaagaag
gatgccgatcattatatcaaacgttattttgaaacatatccaaaggtaaaaggattctta
gaaaatcttgtttcagatgccaaagagaaaggttatgttaccacgttatatcatagaaga
agaccaattcctgaattagcatccagcaatttcatgcaacgtgcgtttggcgaacgaatc
gctatgaactcaccaattcagggaacggcagcagatattatcaagattgcaatgatccgt
gtaaataaacgattaaaagaagcaaatatgaaatcacaattattgcttcagatccacgat
gaattattagtcgagacacatgaatctgaaattgaacaagtcaaacagatcatgttagaa
gagatgcaaggggtatcttccttagcagtacctcttgagattgaagtaatgcagggaaat
aactggtacgaatctaaatag

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