Lachnospiraceae bacterium KM106-2: lbkm_1408
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Entry
lbkm_1408 CDS
T08927
Name
(GenBank) transcriptional regulator, PadR family
KO
K10947
PadR family transcriptional regulator
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbx03000
]
lbkm_1408
Transcription factors [BR:
lbx03000
]
Prokaryotic type
Helix-turn-helix
PadR family
lbkm_1408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PadR
HTH_34
TrmB
Staph_reg_Sar_Rot
HTH_27
FUR
PSI_PsaE
Fe_dep_repress
KAP
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BBF42724
UniProt:
A0A7U6KEZ5
LinkDB
All DBs
Position
complement(1452140..1452454)
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AA seq
104 aa
AA seq
DB search
MDIQLKKGLLEFCVLAVLKKSDSYGYQIVKDVSSCITISESTLYPILKRLEAANYLTTYS
VEHNSRLRKYYKITDEGVDHIDGFLGEWNEVMAVYEFIKGEKKE
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggatatacagttaaaaaaaggattgcttgaattttgtgttcttgcagttctaaaaaag
tctgactcctatggttatcagatcgtaaaggatgtatcttcttgtattacgatctcggaa
tctaccttgtatccaattctaaagcgtttagaagcagcgaactatttaactacttactcc
gttgagcataatagcaggcttcgtaaatactataagatcacagatgaaggggtcgatcat
attgatggttttttaggtgagtggaatgaagttatggcagtttatgaatttataaagggg
gagaagaaagaatga
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