Lachnospiraceae bacterium KM106-2: lbkm_1736
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Entry
lbkm_1736 CDS
T08927
Name
(GenBank) clostridial MutS2-related protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
lbkm_1736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_1736
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
lbkm_1736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
Spectrin_5
Motif
Other DBs
NCBI-ProteinID:
BBF43050
LinkDB
All DBs
Position
complement(1811726..1813639)
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AA seq
637 aa
AA seq
DB search
MNQTFENLGYTLILQQLQEYTSTNQAKQMIQELKPFLSELELRKNLKETSEARKMLDLLG
TPPIPSMERIDEFITKAVQGELIEPDDIESIGRFLAAVRRMKDYLEKGSKEGLSLAFYYE
NLDSEVALRELILQCIRNGRVDDQASSTLAEIRRDLLRLEDKIKQKGEASLRNYKAYLSE
NFVVTRNGRICIPIKSQYKHKVKGSVIDKSATGSTLFIEPDSVSKLQDEYEQHKIEEDTE
ERRILYWILDEIAKEEAALRENIRVIGKLDFVFAKGKLSVDMNAATPEILTEHYIYLKNA
RHPHLNPDQCVPLTIELGREKKGMIITGPNTGGKTVTIKTVGLMSLMACSGLHVPCEIAK
IGMSSQVLCDIGDGQNMKDNLSTFSAHITNIISILKRMNEESFIILDELGSGTDPQEGMG
IAIAILEEIRKSGCLFLVTTHYPDVKSYATRHPEIENARMAFDREALKPLYQLEVGEAGE
SCALYIAKRLGLPETMLEVAAKEAYKEESEAIIAALCNDTENRTLKKEKSARIKKQKADN
RKQMDTIFSRGDSVQVNPDGKLGIVVQSENEKGLVLVQVQKEKFYVNQKRLTLKVKADQL
YPPDYDFSILFDSVKVRKARHQMLRKYEEGLEITIKE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacatttgagaatttaggatatacactaatattacaacagttacaagaatac
acgagtactaaccaggcaaaacaaatgatccaggaattaaaaccttttctgtcagaactt
gagctaaggaagaatctaaaggagacttcggaagcaagaaaaatgttagatcttttgggc
acacctccgatcccttccatggaacggattgatgagtttattacgaaggcagtccaggga
gaactaatagagccagatgatatcgagagtattggaagattccttgcagctgtgagacga
atgaaagattatctggaaaaagggagcaaggaaggcttatcattagcattctattatgaa
aatctggattcagaagtagcgttaagagaactgatcttacaatgtattcgaaatggtcgt
gtggatgatcaggcaagcagtacattagctgagatcagaagagatttacttcgactagag
gataagatcaagcagaaaggagaagcctctcttcgcaattataaagcctatctatcagag
aattttgtagtgacaagaaatggacgaatctgcattccaataaagagtcagtataaacac
aaagtgaaggggagtgtgatcgataagtcagcaacgggatctaccttgtttatagagccg
gatagtgtatcaaaattacaagatgagtatgaacaacacaagatcgaggaggatacggaa
gaaagaaggatcctttattggatattagatgagattgcgaaagaggaagcagcgcttcgt
gagaatattagagtaataggaaaactagattttgtttttgcaaaagggaaattaagtgta
gatatgaatgcagccacgccggaaatattgacagaacactatatttatcttaagaatgca
aggcatcctcatctaaatccagatcaatgcgttcctcttacgattgaattaggcagagag
aaaaaaggaatgatcataacgggtcccaatacaggaggaaagaccgtgacgatcaagacc
gtgggtttaatgagccttatggcatgctcgggtcttcatgttccgtgtgagattgccaag
atcggtatgagcagtcaagtgctttgtgatattggagatggacagaatatgaaagataat
ttatcgaccttctcagctcatattacaaatattatctcaatattaaaaaggatgaatgag
gaatcctttatcattctcgatgaattaggatctggtaccgatcctcaagagggaatggga
attgccattgctattttagaggaaattagaaaaagcggatgtttattccttgtaacaacc
cattaccctgacgtgaagagttatgccacaaggcatcctgaaatcgagaacgcaaggatg
gcatttgatcgagaggcacttaagccactgtatcagttagaagtcggagaagcaggagaa
agttgtgctctttatatcgcgaaacgattaggattaccagaaacaatgcttgaggtagca
gcgaaagaggcttataaagaagagtcagaagcgattattgcagcattatgtaatgatacc
gaaaatcgaacgctaaagaaagagaagtcggcaagaattaaaaaacagaaagctgataac
agaaagcaaatggatacgatcttttcaagaggagatagtgtgcaagttaatccagatggg
aagttaggaattgtagtgcaatcagagaatgagaaagggcttgttcttgttcaggtacag
aaggagaagttttatgtcaatcagaaacgattgacgcttaaggtgaaagcagatcaattg
tatccacctgattatgacttttcaattctatttgattctgtgaaagttagaaaggcaaga
caccagatgcttcgaaagtatgaggaggggctggagattaccataaaagaatag
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