Lachnospiraceae bacterium KM106-2: lbkm_1999
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Entry
lbkm_1999 CDS
T08927
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx03030
DNA replication
lbx03430
Mismatch repair
lbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lbkm_1999
03430 Mismatch repair
lbkm_1999
03440 Homologous recombination
lbkm_1999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbx03032
]
lbkm_1999
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_1999
Enzymes [BR:
lbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lbkm_1999
DNA replication proteins [BR:
lbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lbkm_1999
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lbkm_1999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BBF43311
UniProt:
A0A7U6QJT3
LinkDB
All DBs
Position
complement(2101025..2102002)
Genome browser
AA seq
325 aa
AA seq
DB search
MQIIKEDIKKNEYKSVYLLYGSEDYLKKLYRNKLKAAMLGGSDEMNYNYYEGKGIDVSQV
IGIAETLPFFSDRRVIVLENTGFFKAQSDLADYIKTMPDTTHMVFVESEVDKRNRLYKAV
KEVGYISEMNGMDEKNLKLWILSILNRSGKKITESTMLYFLGKTGSDMDNINNELNKLIA
YVGDRDVVTANDVDEICTTTLTSKIFNMIDAIASKKQNVALDLYYDLLALKEKPMSILFL
ISRHFNILLQVKDLVRLGYNNSVIAKKVGVPPFAITKYAAQSRNFSNAMLIDALSMCVDI
EEQVKTGRMIDKMGVELLIVKYSQK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataataaaagaagatattaagaaaaatgaatataaatcagtctacttactctat
ggttcggaggactatttaaagaaactatatcgtaataaattaaaagccgccatgttaggc
ggaagtgatgaaatgaactataactattatgaaggaaaaggaattgacgtatctcaagta
attgggattgcagagactttgcctttctttagtgacagacgtgttattgtattagagaat
accggtttttttaaggcgcaatctgatttggcagattatattaagacgatgccagataca
acacatatggtctttgtagaaagtgaagtagataaacgaaatcgactttataaagccgtg
aaggaagttggctatatttctgaaatgaatggaatggatgagaaaaacctaaagttatgg
atcctttctattctaaatcgttcgggtaagaagattacagaatctacgatgttgtatttt
ctaggtaagaccggaagtgacatggataacattaataatgaattaaataagcttattgcc
tatgttggtgaccgggatgtcgttacagcaaatgatgtggatgagatctgtacgaccaca
ttaacgagtaagatctttaatatgatcgatgctattgccagcaagaaacagaatgtggca
ttggatctatattatgatctattagcgctaaaagagaagccgatgtcaatcttatttcta
atctctagacattttaatatattactacaagtaaaggatttggtgcgattaggctataat
aacagtgtaatcgcaaagaaggtaggagtgccaccgtttgcgattacaaagtatgcagca
caaagtagaaactttagtaatgcgatgttgatcgatgctctttcaatgtgtgtcgatatc
gaagaacaagttaagacaggtcgtatgatcgataagatgggtgtcgaattgttgattgta
aaatacagtcagaaatag
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