Lachnospiraceae bacterium KM106-2: lbkm_2055
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Entry
lbkm_2055 CDS
T08927
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx00500
Starch and sucrose metabolism
lbx01100
Metabolic pathways
lbx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
lbkm_2055
Enzymes [BR:
lbx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
lbkm_2055
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Gene cluster
GFIT
Motif
Pfam:
CBM26
Alpha-amylase
YIEGIA
Motif
Other DBs
NCBI-ProteinID:
BBF43367
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Position
complement(2156085..2157899)
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AA seq
604 aa
AA seq
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MLLRVKEKRNKGIRLLLILLLFINLALASTSCTNDDTGSNLKRTDQITVKGLDNNALSHC
ENIRNGAILHTFCWNFKTIKANMASIAKAGYTSIQTSPINQVDNTYDALKWYGGAEDGSK
GMWWWYYQPTDWKIGNYQLGTRDDFKEMCEEADRYGIKVIVDVVPNHTAQNKSKVAKELI
DAAGGKLYHDTGLTKCENYSDRLQCTRYSMDGKLPDVDTENKGFQDYFIHYLDDCIACGA
DGFRYDTAKHIGLADDDRPNEVVNNFWKRVTTEITEPSKIFSYGEVLQGDNERITEYVKE
LGAATASGYGYKIRECIKQGTIDCSQLRDYQVDAGVDTSKLVTWVESHDNYINDGTWKEL
TNAQIKLGWALIGARKDGAPLFFDRPANGGPDDKWGDNVIGPAGSDLYKDTDVVAINQFR
NAMEGEKETLRNLDQEKQVLMIERGKRGIVLINLKDSDYQVDTSCSFKKGDYSSMTANKS
KFTADGEKITGKIPAKSFVVLVDEDKSEEQEQKITVHFNKPEEWKDTIYAYVYNENGEEL
QKWPGNLMEKEKDGSYSFSYEEDYENPLIIFTDGEEQVPEVNQKGFSVENNGVYNDKGFL
GPNS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgttactaagagtaaaagaaaagagaaacaaagggatcagactgcttctgatacttctt
ttgttcattaacctagcgctagcgagtacaagctgtactaatgatgataccggctctaat
ttgaaaagaaccgatcagattacggtaaaaggtctcgataacaatgcactttctcattgt
gaaaatatacgtaatggtgctattttgcacacattctgctggaatttcaagaccattaaa
gcgaatatggctagtattgcaaaagcaggctatacgagcatacagacttctccgatcaat
caggtggataatacatatgatgcattaaaatggtatgggggagcagaggacggatcgaaa
ggaatgtggtggtggtattatcagcctacagactggaagattggcaattatcagctaggg
acaagagatgattttaaagagatgtgtgaggaagcagatcgatatggaatcaaagtgatc
gtggatgtagtgccaaatcatacagcacagaacaagagtaaagtagcaaaagaactgata
gatgcagcaggaggtaaactctatcatgataccggacttacgaaatgcgagaactacagt
gatcgattacagtgtaccagatattccatggatggaaagttaccagatgtggataccgag
aataaaggatttcaggactattttattcattatctagatgactgcattgcctgtggggca
gatggattccgatatgatacagcgaagcatattggattagcggatgatgacagaccaaat
gaagttgtgaataacttctggaaacgggtaacaactgaaataacggaaccatctaaaata
tttagttatggagaggtactacaaggagataatgagagaatcacagaatatgtcaaggag
ctgggcgcagccacagcgagcggatatggatataaaataagagagtgtatcaaacaagga
acgatcgactgcagtcaattgagagactatcaggtagatgcaggagttgatacctctaag
ctggtaacatgggtagaatcccatgataattacataaatgatggaacatggaaagagctt
acgaatgcacagattaaattaggatgggcgcttataggcgcaagaaaggatggagctcct
ctcttttttgatcgtcccgcgaacggtgggcctgatgacaaatggggagataatgtaatc
ggaccagcaggaagtgatctatataaagatacagatgttgttgctatcaatcagtttcgg
aatgcgatggaaggagaaaaagagacattaagaaacctagatcaagaaaagcaagtgctg
atgatcgaaagaggaaaacgaggtatcgtgttgatcaatttaaaggactccgactatcaa
gtagatacaagttgttctttcaagaaaggggattatagtagtatgacagcaaacaagagt
aagtttacagctgatggagaaaagataacagggaagattccagcaaagtcatttgttgtc
cttgtagacgaggataagagtgaagaacaagagcagaagatcacagttcattttaataaa
ccagaggaatggaaagatactatctatgcgtacgtttataatgaaaatggggaagaactt
caaaagtggccgggaaacttaatggaaaaagaaaaggatggtagttattccttttcctat
gaggaagattatgagaatcctttgatcatatttacagatggtgaggagcaagttccagag
gtaaatcaaaaaggattttctgtcgaaaataatggcgtttacaatgataaaggattttta
ggaccaaattcttaa
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