Lachnospiraceae bacterium KM106-2: lbkm_2525
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Entry
lbkm_2525 CDS
T08927
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbx03009
]
lbkm_2525
Enzymes [BR:
lbx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
lbkm_2525
Ribosome biogenesis [BR:
lbx03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
lbkm_2525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BBF43837
UniProt:
A0A7U6QJZ0
LinkDB
All DBs
Position
complement(2622088..2622867)
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AA seq
259 aa
AA seq
DB search
MRLDKYLIQASIGMRKEVQPLIREGLVTVNGNVVTVPETIICEKTDCITYRGEKISLGKR
QYYMLHKPAGYITARSDAEKATVLDLFQNVNTNSLFPVGRLDKDTEGLLFLTNDGAFDQF
LMNPKCHVEKTYFFWALGSLSEEDKAALCNGLSIGEGEKLTKPARLTIVREGLYDVLKEE
IISPIICKVKMKPEGQPVVAGYLTISEGRKHQVKRMLKAVGCYIIYLKRTTIGPVALDES
LPKGQYRALSEEEVRSLLD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagataaatatttgatccaagcttcgatcggaatgagaaaagaggttcagcct
ctgatccgagaaggtttggtgactgtgaatggtaatgtagtcacagtgccggagacgatc
atctgtgagaagacggattgtattacttaccgaggagagaagatcagtctgggaaaacgt
caatactatatgctgcataaaccggctgggtatattactgcaaggtcggatgcagaaaag
gcaacggtattagatttatttcagaacgtgaatacgaattccttattcccagttggaaga
ttagataaagatacggaaggcttattattcttaaccaatgacggtgcgtttgatcagttc
ttaatgaatccaaagtgtcatgtagagaagacttatttcttctgggcacttggctcttta
tcggaagaagataaggcagccttatgcaatggactttcgattggagaaggagagaagtta
acaaagccggcgcgccttacaattgtaagagagggactttatgatgtcttaaaagaggag
atcattagtccgatcatttgcaaggttaaaatgaaaccagaagggcagccggttgtagca
ggatatctgaccatttcggaaggaagaaagcatcaggtgaaaagaatgttaaaggcagtt
ggctgttacattatatatctaaagagaacgacaattggtccggttgcattagatgaatcc
cttcccaaggggcagtaccgagcactttcggaggaagaagttcgttctctactagattag
DBGET
integrated database retrieval system
