Lachnospiraceae bacterium KM106-2: lbkm_2765
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Entry
lbkm_2765 CDS
T08927
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_2765
Enzymes [BR:
lbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lbkm_2765
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
lbkm_2765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DotZ
DUF7735
Motif
Other DBs
NCBI-ProteinID:
BBF44077
UniProt:
A0A7U6QK76
LinkDB
All DBs
Position
complement(2930844..2934347)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSLQLILGSSGSGKSHALYQEIIEKSMQYKDMNYIVVVPEQFTMQTQKDLVTMHPDHGVM
NIDILSFVRLAYRVFEETGRDPGIVLEDTGKNMVLRKVIANKQDELTLFQSNVRKQGFVS
ELKSLLSEMLQYSIGPEELEKMIELTSNRHMLSGKLKDMLVIYNGFKEFLSEKYITAEEV
LDVLCSVIEDSNILKKSVLCFDGFTGFTPSQYKLLQCLLPICKKIIVTVTIDPRENIRMI
DEEYKLFHMSKKTIAKLYEVAESAGSSVDKPVYVRENETPYRFVESATLASLEHNLFRYP
YKQYRGEQSDVRVLVGKDAAVEVDFTVREIKRLVQDENYRYKDIAVVTGDLAMFGPKIQK
EYRRAEIPCFVDLKKSISNNPLVELIRAALDVLIRDFSYESVFRFLRCGLVDIPEDDIDQ
LENYVIALGIRGIRMWEKEWTRIYRTKGELDLEKINEVRTQVVEMLDEFHEALTKKEVTI
AEMTQALYAFLLKEEAGIKIERYRIRFENSGELLLAKEYKQVYGIVLELLDKLVELLGDE
QISIKEYKELVESGLEEAKVGLIPPGIDQVVVGDIERTRLKDIKALFFIGVNDGIIPKSN
AQGGIISDLERELLTSMDITMAPTRRQATFIEQFYLYLNLTKPTNKLYVTYSKVGSNGKA
VRSSYIISKLQQLFTDLAVEDLDLVKDENDVLEVLGADQGLRYLLDGLRGFDGEHATTLW
KELFTWYKSREDKQWLLEKGIEGACYENEESNLNRAIAAALYGKDLTNSVTRLEKYAACA
YAHFLSYGLDLNPRQEYQLRMPDIGTIFHTAMELFAKKLQSSKYNWNNIPEPVRNEIVEE
SVKEASLNYNNTIMLSSKRNEYMIKRVERITKRTVWALCEHVRRGNFVPSGFELKFSQLD
HLDTVNIPLNNHQMMHLMGRIDRVDTCVDEDDVLVRVVDYKSGTTGLDLGKLYHGLQLQL
VVYMSAAVELEEKQHPDKLVIPAGIFYYNMNDPVVMKQLDASEEEEHSDEWKEKIENEIL
KELKMNGLVNQEEKVIKAMDHSFVDEEEEHLKGSVSSSIVPVETTKDGSIGKRSSTANRA
QFNKLSSYVKRKIKEYGDEIVNGTIALNPYELNDRTACEYCEYASVCGFDQKLPGNEYRK
LPKFAKEQVWDEISEKLKEEEGEEENE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacagcttattttgggcagcagtggttccggtaaatcacatgccttatatcaa
gaaattatagagaaatccatgcaatataaagatatgaattatattgtagttgtaccagaa
cagtttaccatgcagacgcagaaagacttagtaaccatgcatccagatcatggtgttatg
aatattgatatcttaagtttcgttcgtttggcttatcgtgtatttgaggagacaggacgg
gatcctggtatcgtgttagaagataccggtaagaatatggtacttcgtaaagttatcgcc
aataagcaggatgagcttacgttgtttcaatctaatgtacgaaagcaaggatttgtctca
gaattaaaatccttgctttctgaaatgttacagtatagtatcggcccagaagaattagag
aagatgatcgagttaacaagcaatcgtcatatgttatcaggaaaattgaaagatatgctt
gttatctataatggttttaaagaattcttgagtgaaaaatatattacggcagaagaagtt
ctagatgtactttgttccgtgatcgaggactctaatatcttaaagaaaagcgttttatgt
tttgatggctttacaggttttacaccatctcagtacaaactgcttcaatgtttattacca
atttgtaagaagatcatcgtgacagttaccattgatccaagagaaaatatccgtatgatc
gatgaagaatacaagcttttccacatgagtaagaaaaccattgcaaagttgtatgaggtg
gcagaatcagcgggaagctcggtggataaaccagtttatgtgcgagagaatgagacacca
taccgctttgttgaaagtgcaactttagcaagcttagagcataatttattccgttatcct
tataagcagtatcgtggagagcagagtgacgtacgggtattagtaggaaaggacgcagcg
gttgaagttgattttacggtccgtgagattaagcgccttgttcaagatgagaattatcgc
tataaggatatcgcggtcgtaaccggtgatctagccatgtttggtcctaagatccagaag
gaataccgccgtgctgagattccttgttttgtggatttaaagaagagcattagcaacaat
ccattagttgagttgatccgtgcagctcttgatgtattgatccgtgatttctcttatgag
agtgtatttcgatttttacgctgtggtctggtagatattccggaagatgatatcgatcag
ttagagaactatgttatcgctcttggaatccgcggaatccgtatgtgggagaaagagtgg
acaagaatttaccgaaccaaaggagaactagatttagagaagattaatgaagttcgtact
caggtagttgagatgcttgatgagttccatgaggcgttgacaaagaaagaagttaccatt
gctgagatgacacaggcgctttatgcctttttattaaaagaggaggcaggaattaagatc
gagcgctatcgaatccgttttgaaaacagcggagagctgcttcttgcaaaagaatataag
caagtctatggaatcgtactagagttattagataagctagttgaattattaggcgatgaa
cagatttcaattaaagaatataaagagttagtggagagcggattagaagaggcgaaagtt
ggtttgatccctccaggaatcgatcaggttgtggttggtgatattgaaagaactcgtttg
aaagatatcaaagcactcttctttatcggtgtaaatgatggaattatccccaagagcaat
gcccaaggtggaattatcagcgatttagaacgtgagctgttaacaagtatggatattacc
atggcaccaacgagaagacaggcaacttttatcgagcagttttatttatatctgaattta
acaaagccaacgaacaagctgtatgtgacctatagtaaagtaggaagcaacggaaaggca
gttcgatcctcttatattattagtaaattgcagcagctgtttacggatcttgccgtagaa
gatttagatttggtgaaggatgaaaatgatgtacttgaagtattaggagcagatcaggga
cttcgttatctcttagatggacttcgagggtttgacggagaacatgcgactactctttgg
aaggaactatttacttggtataaatcaagagaagataagcaatggcttttggaaaaggga
attgaaggagcttgctatgaaaatgaagaatcgaatctgaatcgtgcgatcgccgctgcc
ctttacggaaaagatttaaccaattcggttacccgtttagaaaaatatgcggcttgtgcg
tatgcacatttcttaagctatggattagatttgaatccaagacaggaatatcagcttcgt
atgcctgatatcggaactatttttcatacagcgatggagttatttgcgaaaaaactgcaa
tctagtaaatataattggaataacattcctgagccagttcgaaatgaaattgtggaagag
tctgtaaaggaagcttctcttaactataataatacgatcatgttaagcagtaagcgtaat
gagtatatgatcaaacgtgtggagagaattacgaaacgtacggtatgggccctttgtgaa
catgtccgaagaggtaattttgtaccaagtggttttgagttaaagttctcacaactagat
catttagataccgtgaatattccattgaataatcatcagatgatgcatctgatgggacga
atcgatcgcgtggacacttgtgtggatgaggatgatgtattagtccgtgttgtggattat
aaatcgggtacaacaggattggatctaggtaagctatatcatggacttcaattacagctt
gttgtatatatgagcgcagctgtagagttggaagagaaacagcatccagataagcttgtc
attccagccggtatcttctactacaatatgaatgacccagttgttatgaagcagctagat
gcctcagaagaggaagagcacagcgatgagtggaaagagaagattgaaaatgaaatctta
aaagagttaaaaatgaatgggcttgtaaaccaggaggagaaggtcatcaaggcgatggat
cactcttttgtagatgaagaagaggaacatctaaaaggaagtgtctcttctagtattgtt
ccggttgagacaacaaaagacggttccatcgggaaacgttctagtacggctaaccgtgcg
caatttaataagttaagcagttatgtaaaacgaaaaataaaggagtatggtgatgaaatt
gtaaatggtacgattgcactaaatccttatgaattaaatgatcgaactgcttgtgaatat
tgtgaatatgccagtgtatgtggttttgatcagaaacttccaggaaatgaatatcgtaaa
ttaccaaagtttgcgaaggaacaagtatgggatgagatcagcgaaaaattaaaggaagag
gaaggagaagaggaaaatgagtaa
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