Lachnospiraceae bacterium KM106-2: lbkm_2978
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Entry
lbkm_2978 CDS
T08927
Name
(GenBank) dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
lbkm_2978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbx02000
]
lbkm_2978
Transporters [BR:
lbx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
lbkm_2978
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IntS11_C
Motif
Other DBs
NCBI-ProteinID:
BBF44289
UniProt:
A0A7U6QKS5
LinkDB
All DBs
Position
complement(3156272..3157846)
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AA seq
524 aa
AA seq
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MKKNSLTKLALLLTVMTVALSGCSGDKSKSDSSPSPNVEDNMSQGKPTNGGSIVVGIQQD
LDSLDPGKAIAAGTKEVLFNIFEGLVKPDEKGNLVPAVASKYEVSKDGKTYTFTLRDGVK
FHNGNVVTAEDVVYSIKRSAGLLDKTDKSVYVDSALQNISKVEKTDDKTIVVSLKSADTE
LIGYMTLAIIPKDYDKQDSAPVGTGPFKFVSYKPLESFVVEKNDDYWNQDGKAYLDKVTF
KIVANTDSAFTELTAGSIDIYPYLTDDQATQLKNQFNVEVGNMNLVQGLFLNNDKEPFNN
EDVRKALNYAIDKQAILDMVAGGRGNILGSNMYSGYKKYFDSSLVNMYQTDAAKAKEYLT
KAGYPNGFTFTITVPSNYQYHVDTAQVIVEQLKSVGITAKIQKVEWNTWLSDVYQKRNYQ
ATIVGLDGKLSARSLLERYSSKATNNFVNYKNEEYDKVLDTAINTVDDKEKVASYKTLQK
LLAEDAASVYIQDPPLLVAVNKKLGGYTFYPVYVQDMAKVYLKK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaattcattaaccaagcttgcgcttctattaactgtcatgactgttgcactg
agtggatgctcaggcgataagtcaaagagtgatagcagcccatctccaaatgtagaggat
aatatgtctcaaggaaagccaacaaacgggggaagtatcgtagttggcatacagcaggat
ttggatagtcttgacccaggtaaagcaatcgcggcaggaactaaagaagtgttgtttaat
atttttgaaggtttagtaaaaccagatgaaaagggaaatttagttccagctgtagcaagt
aaatatgaagtttccaaagatggaaagacttatacgttcacgttacgtgatggtgttaag
ttccacaatggaaatgttgttacagcagaggatgtagtatattcgattaagcgaagcgcg
gggttattggacaagactgacaagtctgtttatgttgactcggcgcttcaaaacatttcg
aaggtagaaaagacagatgataagaccatagttgtttcattaaagagtgcagatactgag
ttgatcggttatatgacacttgcgatcattccaaaggattatgataagcaagacagtgct
ccagtcggaacgggtccatttaaatttgtatcttataagccattagaaagttttgttgtg
gagaaaaacgatgattactggaaccaagatggcaaagcatatcttgataaagttaccttt
aagatcgttgcaaacacagatagcgcatttactgagcttacggcaggttccattgacatc
tatccatatttgacagatgatcaggcaactcagctaaagaatcaatttaatgtagaagta
ggtaatatgaacttagttcaaggtcttttcttgaacaatgacaaagagccatttaacaac
gaggatgttcgtaaagctttaaattatgcaattgataagcaagcgatccttgatatggtg
gcaggtggaagaggtaatattttaggatccaatatgtattctggatacaaaaaatatttc
gattctagtctagtgaatatgtatcagacagatgcggcaaaagcaaaagagtatttaaca
aaagccggatatccaaacggttttacatttacaattacagtaccaagcaattatcaatat
catgttgatacagcacaggtaattgtagagcagttaaagagtgttggaattacagctaag
attcagaaagtggaatggaatacatggttaagcgatgtataccagaaacgtaactatcag
gcaacgatcgttggacttgatggtaaattatcagcaagatccttattagagcgttactct
tcaaaagcaactaacaactttgtaaattacaaaaacgaagagtatgataaagtgctcgat
actgcgatcaatacggttgatgataaggaaaaagtagcaagttataaaacattacagaaa
ttattagctgaggatgcagcgagtgtttacatccaggatccaccactattagtagctgtt
aataaaaagcttggtggatacacattctatccagtatacgtacaggatatggcaaaagta
tatttaaaaaaataa
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