Lachnospiraceae bacterium KM106-2: lbkm_3077
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Entry
lbkm_3077 CDS
T08927
Name
(GenBank) transcription accessory protein with S1 RNA-binding domain
KO
K06959
protein Tex
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
lbkm_3077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
HHH_9
S1
HHH_7
YqgF
S1_RRP5
HHH_6
T2SSK
OVT1
Motif
Other DBs
NCBI-ProteinID:
BBF44364
UniProt:
A0A7U6QKV1
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Position
complement(3246833..3248980)
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AA seq
715 aa
AA seq
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MNILKQLKDELKIELWQVEATVKLIDEGYTIPFIARYRKEQHGSLNDEVLRNLNERLTYL
RNLEDKKAQVIASIEEQGKLTEELRKQIMSATTQVVVEDLYRPYRPKRRTRATIAKEKGL
EPLANIIWLQLSDKSIEEVAQEFISEEKEVNSAEEAIAGAKDILAESISDEADYRIYIRK
LTFSKGKIVSTAKDEKEQSVYEMYYNFEEPLSKLAGHRVLALNRGENEKILTVKVVAPEE
DILRYLKKNIIIRENPYTTSILNDVVEDCYKRLIAPAIEREIRSDLTETAEDGAIKVFGK
NLEQLLMQPPITGQVVLGWDPAFRTGCKLAVVDATGKVLDTTVVYPTEPQKKIKETKEVV
KKLIDKYGITLISLGNGTASRESEMIIVEMLKEFNKPIQYVIVNEAGASVYSASKLATEE
FPNFDVGQRSATSMARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSEALNGVVEGCVN
KVGVDLNTASASLLEYVSGISKAVAKNIVVYREENGIFTDRKQLLKVAKLGPKAYEQCAG
FLKIIGGKNPLDATSVHPESYEAAKTLLRHLGYTPEDITNGNLSAVGKQIKERSKVAADL
GIGEITLDDIIKELEKPGRDPRDEMPKPILRTDVLDMKDLKEGMILKGTVRNVIDFGAFV
DIGVHQDGLVHISQLTNKKFVKHPLDVVSVGDIVDVKVMSVDLAKKRIQLTMILD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattaaaacaattaaaagatgaattaaagatagaattatggcaggttgaagca
actgtaaagttgatcgatgaaggatatacaattccatttattgctcgttatcgtaaagaa
caacatggttccttaaatgatgaagtattacgtaatttgaatgagcgacttacgtattta
cgtaacttagaagataagaaagctcaggttatcgctagtattgaggaacagggaaaatta
acggaagagttaagaaaacagattatgagtgctacaacacaggttgttgtagaagattta
tatcgtccttatcgaccaaagagaagaacacgtgcgacaattgcaaaggaaaaaggatta
gagccattagcaaatattatttggttacagttatcagataaaagcattgaagaagtggca
caagaatttatttctgaagaaaaagaagttaatagtgccgaggaagcaattgcgggtgca
aaagatattcttgcagaatcaatttcggatgaagcggattatcgtatctatattcgtaaa
ttaacgttttcaaagggaaagatcgtttctactgcaaaagatgagaaggaacagagtgtt
tatgagatgtattataattttgaagaacctcttagtaagcttgcaggacacagagttttg
gcattaaatcgtggtgaaaatgagaagatcttaactgtaaaagtggtagcgccagaagaa
gatatccttcgttatttgaagaaaaatattattattagagagaatccatatacgacatct
attttaaatgatgtagttgaggattgttataaacgtcttattgcaccagcaatcgagaga
gaaatccgcagtgatcttaccgaaacagcagaagatggtgcaatcaaagtttttggtaag
aacttagaacaattattaatgcaacctccaattacaggacaagtagtcttaggatgggat
ccggcatttcgtacggggtgtaaattagctgttgtagatgcaacaggtaaagttcttgat
acaacagttgtctatccaactgaaccacagaaaaagattaaagaaacaaaagaagttgtt
aaaaaattaatcgataaatatggaattaccttaattagtttaggaaatggaacagcatca
agagaatctgagatgattattgtagagatgctaaaagagtttaataaaccaattcaatat
gtaattgtaaatgaagcaggagctagtgtttactctgctagtaagttagcgacagaagag
ttccctaactttgacgtaggacagagaagtgctacttctatggcaagaagattacaggat
ccattagcagaattagttaagatcgatccaaaatcaattggtgtaggtcaatatcaacat
gatatgaaccagaagaagttaagtgaagctttaaatggagtagtagaaggctgtgttaac
aaagtcggagttgatctaaatactgcaagtgcttctttgttagaatatgtatctggcatt
tctaaagcggtagctaaaaatatcgttgtatatcgtgaagagaatggaatctttacggat
cgtaaacagttattaaaggttgctaaacttggaccaaaggcatatgaacaatgtgcaggt
ttcttaaagattattggcggtaagaatcctcttgatgcaacaagtgtgcatccggaatct
tatgaggctgctaaaacattgttaagacatttaggatatacacctgaagatatcacaaat
ggtaatttgagtgcagttggtaaacagataaaagaacgtagcaaggttgcagcagattta
ggaattggtgagattacattagatgatatcatcaaagaattagagaaaccaggacgtgat
ccacgtgatgaaatgccaaaaccaatcttaagaacggatgtccttgatatgaaagactta
aaagagggaatgatcttaaaaggaacagttcgtaatgtaattgattttggtgcatttgtt
gatatcggtgttcatcaagatggattggtacacatttctcaattgacaaataagaaattt
gtaaagcatccattagatgttgttagtgttggagatattgtagatgtgaaggttatgagt
gttgatcttgcgaaaaaaagaatccagctcaccatgattcttgactaa
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