Lachnospiraceae bacterium KM106-2: lbkm_3253
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Entry
lbkm_3253 CDS
T08927
Name
(GenBank) prolyl-tRNA synthetase, archaeal/eukaryal type
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
lbkm_3253
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbx01007
]
lbkm_3253
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbx03016
]
lbkm_3253
Enzymes [BR:
lbx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
lbkm_3253
Amino acid related enzymes [BR:
lbx01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
lbkm_3253
Transfer RNA biogenesis [BR:
lbx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
lbkm_3253
Prokaryotic type
lbkm_3253
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
AAA_5
Motif
Other DBs
NCBI-ProteinID:
BBF44540
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Position
complement(3420952..3422385)
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AA seq
477 aa
AA seq
DB search
MAKDKKFVEAITSMEDDFAQWYTDVVKKAELIDYSSVRGCMILRPNGYAIWENIQKVLDA
KFKETGVENVYMPMLIPESLLQKEKDHVEGFAPEVAWVTHGGLEPLQERLCVRPTSETLF
CDFYSNIIQSYRDLPKVYNQWCSVVRWEKTTRPFLRTMEFLWQEGHTAHATQEEAEERTV
QMLNMYADFCEEYLAIPMIKGRKTDKEKFAGAESTYTIEALMHDGKALQSGTSHNFGDGF
AKAFGIQYTDKDNKLQYVHQTSWGMTTRIIGAMIMVHGDNSGLVLPPKIAPTQVMIIPIA
QHKEGVLEKAAELKERLHDFRVKVDDSDKGPGWKFSEQEMRGIPIRIEIGPKDIEANQGV
IVRRDTREKIVVCLDELEAKVAEVLETMQKDMLERARKHRDAHTYVATNYDEFKQTVAEK
PGFVKAMWCGDAACENKIKEDTTATSRCMPFKQEKVADTCVCCGKPAKALVYWGKAY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggacaaaaaatttgttgaagcaattacttcaatggaagatgattttgcacaa
tggtatactgacgttgtaaaaaaagcagaattaattgattactcaagtgtaagaggatgt
atgattctacgtccaaatggttatgcaatctgggaaaacattcaaaaggtattagatgct
aaattcaaggaaacaggtgttgaaaacgtatatatgccaatgttaattcctgagagtcta
ttacaaaaagaaaaagaccatgttgaaggttttgcaccagaagttgcatgggttacacat
ggtggattagaaccattacaagaaagactttgtgttcgtccaacatcagaaactttattc
tgtgatttctactcaaatatcatccaatcttatcgtgatctaccaaaggtatataaccaa
tggtgttctgtagttcgttgggaaaagacaacaagacctttccttcgtacgatggaattc
ttatggcaagagggacatactgctcatgctacacaagaagaagctgaagaaagaacagtt
caaatgttaaatatgtatgctgatttctgcgaagaatatttagcaattcctatgatcaaa
ggtcgtaagacagataaagaaaaatttgcaggtgcagaatcaacttatacaatcgaagca
ttaatgcatgatggtaaggcattacaatcaggaactagccataactttggtgatggattt
gcaaaagcatttggtatccaatatacagataaggataacaagttacaatatgttcatcaa
acttcttggggtatgactacaagaatcattggtgctatgatcatggttcatggtgataac
agcggtcttgtattaccacctaagattgcaccaacacaagttatgatcattccaattgct
cagcataaagagggcgtacttgaaaaagctgctgagttgaaagaacgtttacatgacttc
cgtgtaaaagtggatgattctgataagggaccaggctggaagttcagcgaacaagagatg
cgtggtattccaatccgtatcgaaatcggaccaaaggatatcgaagcaaatcaaggtgtt
atcgttcgtcgtgacacaagagaaaagatcgttgtttgcttagatgaattagaagctaaa
gttgcagaagttttagaaactatgcagaaagatatgttagaacgtgcgagaaaacataga
gatgctcatacttatgttgcaacaaattatgatgaattcaagcaaacagttgctgaaaaa
ccaggatttgtgaaagcaatgtggtgtggtgatgcagcttgtgaaaacaagattaaagaa
gatacaacagcaacatcacgttgtatgccatttaaacaagaaaaggtagctgatacatgc
gtatgctgcggaaaaccagcaaaagctcttgtttactggggtaaagcatactaa
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