Lachnospiraceae bacterium KM106-2: lbkm_3319
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Entry
lbkm_3319 CDS
T08927
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbx03016
]
lbkm_3319
Transfer RNA biogenesis [BR:
lbx03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
lbkm_3319
Prokaryotic type
Methyltransferases
lbkm_3319
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
AIG1
RsgA_GTPase
Arf
GTP_EFTU
Roc
ABC_tran
PduV-EutP
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BBF44604
UniProt:
A0A7U6QL24
LinkDB
All DBs
Position
complement(3491344..3492744)
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AA seq
466 aa
AA seq
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MTEKGKINLKTDTIAAIATAISNAGISIIRISGEEAFTIIDKIYKSPKGNKKLSEQSSHT
AHYGYIVDGEEVIDEVIVLIMKAPSTYTREDVVEINCHGGMIVTKKVLETVFKYGARPAD
PGEFTKRAFLNGRIDLSQAEAVIDVINAKNEYALQSSVKQLRGGIQDKIKAIRENVLYDI
AYIEAALDDPEHMSLEGFDEELSTHVNGNIEKIDKLLDTANNGRIIKEGIQTVILGKPNA
GKSSLLNILVGEDRAIVTDIAGTTRDTLQESINLHGIMLNIIDTAGIRETEDVVEKIGVN
KAKESAKDADLIIYVIDGSRELDENDFEIIELIQDRKAVVLVNKSDLDMVVNVEEIEKKT
NKKVFKISAKDNTGIEEFELYIKDMFFEGKLSFNDEIYITNLRHKSALMDSKESLEKVME
SIQAGMPEDFYSIDLMSAYEKLGEIIGESVDEDVVNKIFKEFCMGK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgacagagaaaggaaagattaatttgaagacagatacgattgcagcaatcgctaccgca
attagtaatgcaggaattagcattattcgtataagtggcgaagaagcgtttacaattata
gataagatatataagtctccaaaaggaaataagaagttgtctgagcaatcaagtcataca
gctcattatggatatattgtagatggagaagaagtgattgatgaggttattgtacttatc
atgaaagctccaagtacttacacaagagaagatgtagttgaaatcaattgtcatggtggc
atgatcgtaacgaaaaaggtattagaaacagtattcaaatatggtgctagaccagccgat
ccgggagaatttacaaagcgcgcatttttaaatggaagaattgatctatctcaggcagag
gcggttattgatgttattaatgcaaaaaatgaatatgcactacaaagttcagtaaaacaa
ttacgtggtggtattcaggataagataaaagcaattcgtgaaaatgtactttatgatatt
gcatatattgaagctgcattagatgatccagagcatatgagtttagaaggatttgatgaa
gaattatctacacatgtgaacggaaatatcgaaaagatagataaattattagatactgct
aataatggacgtattattaaagaaggaatccaaaccgtaattttaggtaaaccgaatgcc
ggaaaatcttctttattaaatatacttgttggagaagatcgtgcaattgtaacagatatt
gctggaacaactagagatactttacaagagtcaatcaatttacatggtattatgttaaat
attatcgatacagccggaattcgtgaaacagaagatgttgtcgaaaagattggtgtcaat
aaagcgaaggaatctgcgaaagatgcagatttaattatctatgtaattgatggttcaaga
gaattagatgaaaatgactttgaaattattgagttaattcaagatagaaaagcagtagtt
cttgtaaataaatcagatttagacatggttgttaatgtagaagaaatagagaagaagaca
aataaaaaagtatttaagatctctgcaaaagataataccggtatcgaagaatttgaatta
tatattaaggatatgttctttgaaggaaaattatcatttaatgatgaaatttatattaca
aatttacgacataaatcagcactaatggatagtaaagaaagtctagagaaggtaatggaa
agcattcaagctggaatgcctgaagatttttattctatcgacttaatgagtgcttatgag
aaattaggggaaataattggtgagtctgtcgatgaagatgtagtgaataaaatatttaaa
gaattttgtatgggtaaatag
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