Lachnospiraceae bacterium KM106-2: lbkm_3329
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Entry
lbkm_3329 CDS
T08927
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbx03032
]
lbkm_3329
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_3329
Enzymes [BR:
lbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
lbkm_3329
DNA replication proteins [BR:
lbx03032
]
Prokaryotic type
DNA Topoisomerases
lbkm_3329
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lbkm_3329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBF44614
UniProt:
A0A7U6KIT3
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All DBs
Position
3502486..3505092
Genome browser
AA seq
868 aa
AA seq
DB search
MDENIFDKVHEVDLKKTMETSYIDYAMSVIAARALPDVRDGLKPVQRRILYAMIELNNGP
DKPHRKCARIVGDTMGKYHPHGDSSIYEALVKLAQDFSTRYPLIDGHGNFGSVDGDGAAA
MRYTEARLSKISVEMLSDINKNTVDFTPNFDETEKEPVVLPARYPNLLVNGTSGIAVGMA
TNIPPHNLRETINAVLKLIDNQVEENRDTSMEELLEIIKGPDFPTGATILGRRGIEEAYR
TGRGKIRVRAVTEVEPMQNGKNKILVTELPYMVNKAKLIEKIAELVKDKKIDGITELRDE
SDRSGMRICIELRRDVNPNIILNQLYKHTQLQDTFGVIMLALVDNEPKVLNLYQMLDYYL
QHQKEVVTRRTQYDLNKAQERAHILEGLLVALDNIDEVISIIRGSKNGAIAKERLIERFS
LTDVQAQAIIDMRLRALTGLEREKIEGEYAELEIKIAEYKAILADENKLLGVIKEELIVV
RDKYGDDRRTAIGYDELDITTEDLIPRENTVIAMTQLGYIKRMTVDNFKAQNRGGKGIKG
MQTIDEDFIVELLMTTTHHYIMFFTNKGRVYRLKAYEIPESSRTARGTAIINLLQLLPGE
KITAIIPLREYEDDRFLFMATKSGIVKKTPMREYQNIRKSGLQAINLREDDELIEVKSTD
NEKDIILVTREGQCIRFAETDVRSTGRTSMGVIGMNLSPTDEIVGMQLNTQGDDLLIVSE
RGMGKRTSVEEFTTQHRGGKGVKCYKITEKTGYVVGVKAVNEDNEIMMITTGGIIIRLMV
SGISKLGRITSGVKLINMNDDIVVASFTKVREGSEQTSEELEIENEELDGQISDNDNSPV
PMDEMTSTDNSLDKLLDRAMDDQSNPEE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaatatcttcgataaagtacacgaagtcgatctgaaaaagacaatggaaacg
tcatatattgactatgccatgtcggttattgcagcacgtgctttaccagatgttagagat
ggattaaagccagtacaaagaagaattttatatgcaatgattgaattgaataatggtccc
gacaagccacatcgtaaatgtgcccgtattgtcggtgatactatgggtaaatatcaccct
catggtgattcttctatttatgaggctttagtaaaactagcacaggacttttcaactaga
taccctctaattgatggccatggtaactttggttctgtcgatggcgatggcgcagcagca
atgcgttatacagaagcacgtttaagtaaaatctcagttgagatgttatccgatatcaat
aagaatacggtagacttcacacctaactttgatgagacagagaaggaacctgttgtactt
ccagcaagatatcctaatctgttagtaaatggtacatctggtattgcagtaggtatggca
accaacatacctccacataacttaagggaaacaatcaatgcagtacttaaacttattgat
aatcaagtagaagaaaatagagatacctctatggaagagttacttgagatcattaaggga
cctgatttcccaactggtgcaacaattcttggtagaagaggaattgaagaagcatatcgt
actggacgtggtaaaatccgcgtaagagccgttacagaagttgaaccaatgcaaaatggg
aaaaataaaattcttgtaacagaattaccttacatggttaataaggctaagttaattgag
aagattgctgaattggttaaggataaaaaaattgatggtattacagagcttagagatgaa
tctgatcgtagtggtatgcgtatttgcatcgaacttagaagagatgtaaatcctaatatt
atcttaaatcaattatacaaacatactcaattacaagatacattcggtgtaatcatgctt
gcattagtagataatgagccaaaagtattaaacttataccaaatgttagattattattta
caacatcagaaagaagttgtaactagaagaactcaatatgatttaaataaagctcaggaa
agagctcatatcttagaaggtttattagttgctcttgataatattgatgaagtaatttca
ataattcgtggatctaagaatggtgcaattgcgaaggaacgattaattgaacgctttagc
ttaacagatgttcaagctcaagctatcattgatatgagacttcgtgcattaacaggttta
gaaagagaaaaaatcgaaggggaatatgctgagttagagattaagatcgctgaatacaaa
gcaattcttgcagatgaaaataaattattaggcgtaatcaaagaagaattgatcgttgtt
cgtgacaaatacggcgatgatagaagaactgctattggttacgatgaattagatattaca
acagaagatctcatcccaagagaaaatacagtaatcgctatgactcaattaggatatatc
aaacgtatgaccgttgataattttaaagctcagaatcgtggtggtaaaggtatcaagggt
atgcagacaatagatgaggatttcattgtagagctattaatgactacaactcatcactat
attatgttctttaccaataagggacgtgtatatcgtctaaaagcatatgagattccggaa
tcttctcgtacagctagaggtactgcaattattaacttacttcagttattacctggagaa
aagattacagctattattccattacgtgaatacgaagatgatcgtttcttatttatggca
acaaaatcaggtattgttaagaagactcctatgagagaatatcaaaatattcgtaagtca
ggtcttcaggcaattaatcttcgtgaagacgatgagttgattgaagttaagtctacagat
aatgaaaaagatatcatcttagttactagagaaggacaatgtatccgttttgctgaaact
gatgttagatctacaggaagaacaagtatgggtgttatcggtatgaacctttctccaaca
gatgaaatcgttggtatgcagttaaatactcaaggagatgatctattgatcgtttctgaa
agaggtatgggtaaacgtacttctgtagaggaatttacgacacaacatcgtggtggtaaa
ggtgttaaatgttataagattactgaaaagacaggctatgtagtaggtgttaaagcagta
aatgaagataatgaaattatgatgattacaacaggaggcattatcattcgattaatggtt
tctggaatatctaaattaggaagaatcacatcaggcgttaagttaattaacatgaatgat
gatattgttgttgcaagctttacaaaagtacgtgaaggcagcgaacaaacttctgaagaa
ttagaaattgaaaatgaagagttagatggccagatatcggataatgataatagcccagtt
cctatggatgaaatgacgagtacagataacagcctagataaattattagatagagcaatg
gatgatcagtcaaatcctgaagaatag
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