KEGG   Lachnospiraceae bacterium KM106-2: lbkm_3528
Entry
lbkm_3528         CDS       T08927                                 
Name
(GenBank) DNA polymerase III polC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lbx  Lachnospiraceae bacterium KM106-2
Pathway
lbx03030  DNA replication
lbx03430  Mismatch repair
lbx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    lbkm_3528
   03430 Mismatch repair
    lbkm_3528
   03440 Homologous recombination
    lbkm_3528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbx03032]
    lbkm_3528
   03400 DNA repair and recombination proteins [BR:lbx03400]
    lbkm_3528
Enzymes [BR:lbx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     lbkm_3528
DNA replication proteins [BR:lbx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     lbkm_3528
DNA repair and recombination proteins [BR:lbx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     lbkm_3528
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 DNA_pol_A_exo1 Rv2179c-like DUF3072 WHD_Cdc6
Other DBs
NCBI-ProteinID: BBF44789
LinkDB
Position
3696462..3697172
AA seq 236 aa
MIDSFVAVDLETTGLSPEANEIIEIGAVRVRNGKVVARMSQLINPNVPLTDKVRELTGIQ
DEMLITQPVWSEVVDEVEEFLGDDILLGHNIKFDYSFLKQNFYKVKKKFEHDTLDTLYLS
RMLLSELPSKSLGNLCNHYGIVNECAHRAVSDAIATMELYQVIAAEHEKNHEELFLPQKV
NYKVKKDEPITARQKNYLIDLIKYHKINKVQDVDILTKSEASRLIDKIIFQYGRMQ
NT seq 711 nt   +upstreamnt  +downstreamnt
atgattgattcttttgttgcagtggatctcgagaccacagggctgtctcctgaggcaaat
gagataattgaaatcggtgcagttagagtaagaaatgggaaagtggttgccagaatgtca
cagctgatcaatcctaatgtgccattaacagataaagtaagggaactcacagggattcag
gatgaaatgttgataactcagccggtttggagcgaggttgtggatgaagtagaggaattc
ctgggagatgatattttacttggtcataatatcaaatttgattatagctttttaaaacag
aatttttataaggtgaagaagaagtttgaacatgatacgcttgatacgttatatttatct
agaatgttattaagtgaattgccaagtaagagccttggtaatttatgcaatcattatgga
attgttaatgaatgcgcccatcgcgcagtatcagatgcaatagcgacgatggagctgtat
caggtgattgcagcagaacatgaaaagaatcatgaagaattgtttcttccacagaaagta
aattataaagtgaaaaaagacgaaccgatcacggcccgtcaaaaaaattacttgattgat
ttaataaaatatcataaaataaacaaagtgcaggatgttgatatccttactaaaagtgag
gcatcaaggctgattgataagattatatttcagtatggtcggatgcagtaa

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