Lachnospiraceae bacterium KM106-2: lbkm_3538
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Entry
lbkm_3538 CDS
T08927
Name
(GenBank) 3'-5' exoribonuclease Bsu YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbx03019
]
lbkm_3538
Messenger RNA biogenesis [BR:
lbx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
lbkm_3538
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
RMI2
Motif
Other DBs
NCBI-ProteinID:
BBF44799
UniProt:
A0A7U6QL86
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All DBs
Position
3707998..3708945
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AA seq
315 aa
AA seq
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MRFIADLHEGDMVNETYLCKQKQTLKTKAGKSYYSLLLQDKTGTLDAKVWELSNGINNFE
AMDYIRVEGQVTSFQNSLQLNVKRIRVSQEGEYVPADYLPTSSKDINQMYEELLQFAGSI
QNIYLKQLVASFFVDDKDFRKAFCFHSAAKSVHHGFIGGLLEHTLGVVRLSDYLAAHYPI
LNRDILISSAMFHDIGKMEELSIFPENDYTDDGQLLGHIMIGVEKIGARIRTIPNFPHKL
ASELKHCIIAHHGELEYGSPKKPATAEALALNFADNADAKLQTMLEIFEGAQDNSEWVGY
NRFFETNLRRSSLKE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagatttattgcagatttacacgagggagatatggtgaatgaaacctatctatgtaaa
cagaaacaaaccctaaagacaaaagcggggaagagttattattctttgctattacaagat
aagacaggaactttagatgcaaaagtatgggaattatcaaatggaattaataactttgaa
gcaatggattacattcgtgtagaaggacaagttacatcttttcagaattcattacaatta
aatgttaagagaattcgtgtgagtcaggaaggagaatatgttcctgctgattacttgcca
acatcatcaaaagatattaatcagatgtatgaggaacttcttcaatttgcaggaagtatt
cagaatatatatttaaaacagttagtagcaagcttttttgtggatgataaagattttaga
aaggcattttgcttccattcagcagcaaagagcgttcatcatggatttattggtggatta
ttagaacataccttaggtgttgttcgtcttagcgattatcttgcagctcattatccaatc
ttaaatcgtgatattttaatttcttcagctatgttccatgatattggaaagatggaggaa
ttatcaatattccctgagaatgattatacggatgatggccagttattaggtcacatcatg
attggcgtagagaagatcggagcaagaattcgtacaatcccgaattttccacataaactt
gcaagtgaattgaaacactgtattatagctcatcatggagagttggaatatggttctcca
aagaaaccagcaacagcagaggcattagcacttaactttgctgataatgcagatgcaaaa
ttgcagacaatgcttgagatctttgaaggtgctcaagataattcagaatgggttggatat
aatcgtttcttcgaaacgaatctacgtcgttcatcattaaaagaatag
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