Lachnospiraceae bacterium KM106-2: lbkm_3681
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Entry
lbkm_3681 CDS
T08927
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbx03032
]
lbkm_3681
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_3681
Enzymes [BR:
lbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
lbkm_3681
DNA replication proteins [BR:
lbx03032
]
Prokaryotic type
DNA Topoisomerases
lbkm_3681
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lbkm_3681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Gp49
Motif
Other DBs
NCBI-ProteinID:
BBF44941
UniProt:
A0A7U6KJH5
LinkDB
All DBs
Position
complement(3858637..3860892)
Genome browser
AA seq
751 aa
AA seq
DB search
MNQTIDNNIIQLDFSEEMKNSYRDYAMSVIISRALPDVRDGLKPVQRRILYAMKELGLAP
DKPHRKSARIVGDTMGKYHPHGDSSIYDALVRMAQDYSLSIPLVDGHGNFGSIDGDSAAA
MRYTEARLSKGALTLLDNLDKGLVDFQPNFDESEQEPVVLPATIPNLLINGTTGIAVGMA
TNIPPHNPVEVIDGVIAYMDRPNISIEGLMNYIPAPDFPTGGTIINQDVLTQIYSTGEGK
LKVRAKHEIEASDNGRKNIVITEIPYTVAGNKTKLVESLSMLMKDKVFDEIYDVRDESSK
EGIRIVIEVKKDRNIDNLLNGLYKKTALEDTYSVNLLAVNKQQPILFNLKSLIEEFVYFQ
EELYTKEYQHLLEKAKARLEIVNGLIKATDVIDLIIEILRGSSSVKQAKNCLINGDTTDI
HFKSDASQKAAASLDFTERQAEAILAMPLSKLIGLEILKLHEENDTLLANIAKYELVLGN
EKELFKVIKERLRSYKKLFNVPRRTMLENVQKAEYVEEVKVEDIYVLIDRFGYTKSIDSA
SYNRIAADTLKEFPHIVMMKNTDKLCLFTVEGNMFQIKASAIPKCKMKDKGVLIHSLCKI
GKEDILLFTCFESLYESQVLFATKNGFVKRVSGAEFETIRSMIAATKLEDDDQLVSVQLL
SAHEVLSDNQKVIMLTEKGVSLGYPLNEVVEQKKTSRGVKGISLDAKDQVIYTISVAADS
ESFEFNNQTLSVKKVHMQKRAAKGRKAQIKL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacgattgataataacattatacaattggatttttctgaagaaatgaagaat
tcctaccgtgattatgccatgagcgtaatcatttcacgtgcacttcctgatgtacgtgac
ggtttaaagccagttcaaagacgtatcctatacgccatgaaagaattaggtcttgcaccg
gacaagccacacagaaagagtgcccgtatcgttggtgatactatgggtaaatatcaccct
catggtgatagttccatttatgacgcccttgttcgtatggctcaggattattctttatcc
attccattagtagatggacatggtaacttcggttcaattgacggtgacagcgccgctgcc
atgcgttatacagaagcaagattaagcaagggtgctcttacccttttagataacttggat
aaaggtttggttgattttcagccaaactttgatgaaagtgagcaggaacctgttgttctt
cctgcaacaattcctaaccttttaattaacggtacaaccggaatcgctgttggtatggca
actaatattccaccacacaatccagttgaagtaatcgatggtgtcatcgcttatatggat
cgtccaaacatttcgatcgaaggtttaatgaattacattcctgctcctgatttcccaact
ggtggaacgatcatcaaccaagatgtcttaactcagatctattctactggtgaaggcaag
ttaaaagttcgtgccaaacatgaaatcgaagcaagcgataatggacgaaagaatatcgtc
atcacagaaattccttatactgtggctggtaataagacaaagcttgtagagtctttatcc
atgctaatgaaagataaagtatttgatgagatctatgatgtacgtgatgaatcctctaaa
gaaggtattcgtatcgttatcgaagttaagaaagatcgtaatatcgataacctattaaat
ggtttatataaaaagacagctctagaagatacgtattctgtaaatcttcttgctgttaat
aagcaacagccgatcctcttcaatttaaaatcgctgatcgaagaatttgtttacttccaa
gaagaactctacacaaaggaatatcagcatttattagaaaaagcaaaagcacgtcttgaa
attgtaaatggtctgatcaaagcaactgacgtgatcgacctgatcatcgaaatcctacgt
ggaagttctagtgtaaaacaagcaaagaactgtttgatcaatggtgatacaacagacatt
cactttaagtctgatgcctcccaaaaagcagcagcctctcttgactttacagagcgccag
gcagaagcgatcttagcaatgccattaagtaaattgatcggtcttgaaattcttaaacta
catgaagaaaacgatacgttacttgcaaatatcgcaaaatacgaattagtacttggaaat
gaaaaagaattatttaaggtgatcaaagagcgtcttcgttcttataagaaactctttaat
gttccaagaagaaccatgcttgagaatgttcaaaaagcagaatatgtagaggaagtgaaa
gtcgaagatatctacgttctcatcgatcgattcggctatactaaatccattgactctgca
agctataatcgtatcgctgctgatactttaaaggaattccctcatattgtaatgatgaag
aatacagacaagctctgcctcttcacggtagagggtaacatgttccagatcaaagccagt
gcgattccaaaatgtaagatgaaagataaaggtgttctgatccattccttatgtaagatt
ggaaaagaagacattttattatttacttgcttcgaatcactttatgaatcacaagtactg
tttgcaacaaagaatggttttgtaaaacgtgtctctggtgcagaatttgagacaatccgt
tccatgatcgccgcaacgaaattagaagacgacgatcaattagtatccgttcaattactt
tccgctcatgaagttctttctgataatcagaaagttatcatgttaacagaaaaaggtgtt
tctcttggttacccactaaatgaagtggtagaacaaaagaagacgagccgtggtgtaaaa
ggaatcagccttgatgccaaagatcaagttatctatacgatatccgtagcagcagattcc
gaatcctttgaattcaacaatcaaaccctttctgttaagaaagtacacatgcagaaacgt
gctgctaaaggacgaaaagcacagattaaattataa
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