Lachnospiraceae bacterium KM106-2: lbkm_3718
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Entry
lbkm_3718 CDS
T08927
Name
(GenBank) hypothetical ATP-binding protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbx03019
]
lbkm_3718
Messenger RNA biogenesis [BR:
lbx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
lbkm_3718
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Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_24
SKI
AAA_28
AAA_22
PRK
SporV_AA
Motif
Other DBs
NCBI-ProteinID:
BBF44978
UniProt:
A0A7U6KJD0
LinkDB
All DBs
Position
3901257..3902117
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AA seq
286 aa
AA seq
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MVTGMSGAGKSSVLKMLEDAGYFCVDNLPIPLISKFATLTFEETEHIDKVALGVDIRSGH
SLEELDTILKEFEEKKYHYEMLFLDASTEVLVKRYKETRRTHPLAKEGRVDKGIELEREK
LEFLKKKSDYIIDTSMLLIRELKTEIDKIFVKNEGFQNFIITVLSFGFKYGIPSDSDLVF
DVRFLPNPYYIPELKPLTGNDAPVYDYVMQSDAAQKFLYKLEDMLKFLIPNYIVEGKNQL
VIGIGCTGGKHRSVTLANAITKKLKELPYGVRVEHRDIEKDSLRKK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaggaatgtcaggtgcaggtaaaagttctgtgttaaagatgttagaagatgcc
ggctatttctgtgtcgacaatttgccaattccactgatctcaaaatttgcaacattaaca
tttgaagagacagaacatattgataaagttgcacttggagtagatattagaagtggtcat
tctttagaagaactagatacgattttaaaagagtttgaagaaaaaaaatatcattatgag
atgttatttttagatgcaagtactgaggtattagtaaaaagatataaggaaacgagaaga
actcatcctcttgcaaaagaaggcagagtagataagggaatcgagctggagagagaaaaa
cttgagtttttgaagaaaaaatcagactatattattgatactagtatgcttttaattcgt
gaattaaagacagagattgataagatcttcgtgaaaaatgaaggatttcagaattttatt
attacagtactttccttcggatttaagtatggaattccaagtgactcagatctagtgttt
gatgttcggttcttacctaatccttactatataccagagctaaagcctttaactggaaat
gatgcaccggtttatgattatgtaatgcaatcagatgcggcacaaaagtttttgtataaa
ttagaagatatgttaaaattcttaattccaaattatattgtagaaggtaagaatcaatta
gtaataggtattggctgtacgggcggtaaacatcgttcggttactttggcaaatgcaatt
accaagaaattaaaagaacttccttatggagtgagggtagagcatagggatatagaaaag
gattccttgcgtaaaaaataa
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