KEGG   Lachnospiraceae bacterium KM106-2: lbkm_3943
Entry
lbkm_3943         CDS       T08927                                 
Name
(GenBank) exonuclease SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
lbx  Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:lbx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbx03400]
    lbkm_3943
DNA repair and recombination proteins [BR:lbx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     lbkm_3943
    Archaeal homologous recombinant proteins
     lbkm_3943
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2 Metallophos_3 Baculo_LEF5_C
Other DBs
NCBI-ProteinID: BBF45184
LinkDB
Position
4151241..4152434
AA seq 397 aa
MKFIHTGDLHIGKQVHEFSMLEDQKYILDEIVNIAKEEEADAILLAGDVYDRSVPPAEAV
SLLDDFLSKLTESGKKVFLISGNHDSPERLSFASEILEREGVYITGLLPDQMKEIVMKDE
FGPIHVYLMPFAKPQVIRQVMTKSSEGKIPSYEESIRNYIGQTIVKEEERNLLMTHHFIT
NQGVEPEQSDSESLISVGGTDNIDVSTFDAFDYVALGHIHRAQKVGRDTVRYSGSPLKYS
FSEVFHKKSVCVIEMKEKGNVEVRLRELNPIRDMRKIKGTLEDLVSSEVVSAGNANDYIE
ATLTDKEELIDPISRLRASYPNIMHLRMEQRERKEEGITEAKEAIKKMSPLEIFEEFYEK
VSGREFTEEKREIMVPIIDEAVSYYHGSEKKTEGGDK
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgaaattcattcatacaggggatttgcatatcggtaagcaggttcatgaatttagtatg
ttagaagatcagaaatatatattagatgaaatcgtaaatatcgccaaggaggaagaggca
gacgcaattttacttgcaggagatgtgtatgatcgttctgtcccaccggcagaagcggta
tctttattagatgattttctatcaaagttaacagagagtgggaaaaaggtgtttttgatc
agcggaaatcatgattcaccggaacgactttcttttgcgagtgagatattagagagagaa
ggggtttatattacgggacttcttccagatcagatgaaagagatcgtaatgaaagatgaa
tttggtccaattcatgtgtatctgatgccatttgccaaaccacaggtgatcagacaggtt
atgacgaaatcaagtgagggtaaaataccttcttatgaagaaagcattcgaaattatatt
ggtcagactattgtgaaagaagaggaacgcaatctcttaatgacccaccattttattacg
aatcaaggagtcgagccagaacagtcagattcagagtcactcatcagtgtaggaggaacg
gataatatcgatgtcagtacctttgacgcttttgattatgttgcattaggacatattcat
agagcacagaaagtaggaagagatacggtgcggtattcaggatcaccactgaagtattcc
ttttcagaggtatttcataagaaatcagtttgtgtgatcgagatgaaggaaaagggaaat
gtagaggtcagattacgtgaattaaatccgatccgtgatatgagaaagattaaaggaacg
ttagaggatcttgtcagcagtgaggtggtaagtgcagggaatgccaatgactacattgaa
gctaccttgacagataaagaagaattgatcgatccaatcagcagattaagagcttcttat
cctaatatcatgcatcttcgaatggaacagagagaacgaaaagaggaaggcatcaccgag
gcaaaagaagcaattaagaagatgtcaccacttgaaatatttgaagaattctatgagaaa
gtatcaggaagagaatttacagaggaaaaacgggagatcatggtaccgatcatcgatgag
gcagtctcctattatcatggaagtgagaaaaaaacggaaggaggcgataagtaa

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