Lachnospiraceae bacterium KM106-2: lbkm_3943
Help
Entry
lbkm_3943 CDS
T08927
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_3943
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lbkm_3943
Archaeal homologous recombinant proteins
lbkm_3943
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
Baculo_LEF5_C
Motif
Other DBs
NCBI-ProteinID:
BBF45184
LinkDB
All DBs
Position
4151241..4152434
Genome browser
AA seq
397 aa
AA seq
DB search
MKFIHTGDLHIGKQVHEFSMLEDQKYILDEIVNIAKEEEADAILLAGDVYDRSVPPAEAV
SLLDDFLSKLTESGKKVFLISGNHDSPERLSFASEILEREGVYITGLLPDQMKEIVMKDE
FGPIHVYLMPFAKPQVIRQVMTKSSEGKIPSYEESIRNYIGQTIVKEEERNLLMTHHFIT
NQGVEPEQSDSESLISVGGTDNIDVSTFDAFDYVALGHIHRAQKVGRDTVRYSGSPLKYS
FSEVFHKKSVCVIEMKEKGNVEVRLRELNPIRDMRKIKGTLEDLVSSEVVSAGNANDYIE
ATLTDKEELIDPISRLRASYPNIMHLRMEQRERKEEGITEAKEAIKKMSPLEIFEEFYEK
VSGREFTEEKREIMVPIIDEAVSYYHGSEKKTEGGDK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcattcatacaggggatttgcatatcggtaagcaggttcatgaatttagtatg
ttagaagatcagaaatatatattagatgaaatcgtaaatatcgccaaggaggaagaggca
gacgcaattttacttgcaggagatgtgtatgatcgttctgtcccaccggcagaagcggta
tctttattagatgattttctatcaaagttaacagagagtgggaaaaaggtgtttttgatc
agcggaaatcatgattcaccggaacgactttcttttgcgagtgagatattagagagagaa
ggggtttatattacgggacttcttccagatcagatgaaagagatcgtaatgaaagatgaa
tttggtccaattcatgtgtatctgatgccatttgccaaaccacaggtgatcagacaggtt
atgacgaaatcaagtgagggtaaaataccttcttatgaagaaagcattcgaaattatatt
ggtcagactattgtgaaagaagaggaacgcaatctcttaatgacccaccattttattacg
aatcaaggagtcgagccagaacagtcagattcagagtcactcatcagtgtaggaggaacg
gataatatcgatgtcagtacctttgacgcttttgattatgttgcattaggacatattcat
agagcacagaaagtaggaagagatacggtgcggtattcaggatcaccactgaagtattcc
ttttcagaggtatttcataagaaatcagtttgtgtgatcgagatgaaggaaaagggaaat
gtagaggtcagattacgtgaattaaatccgatccgtgatatgagaaagattaaaggaacg
ttagaggatcttgtcagcagtgaggtggtaagtgcagggaatgccaatgactacattgaa
gctaccttgacagataaagaagaattgatcgatccaatcagcagattaagagcttcttat
cctaatatcatgcatcttcgaatggaacagagagaacgaaaagaggaaggcatcaccgag
gcaaaagaagcaattaagaagatgtcaccacttgaaatatttgaagaattctatgagaaa
gtatcaggaagagaatttacagaggaaaaacgggagatcatggtaccgatcatcgatgag
gcagtctcctattatcatggaagtgagaaaaaaacggaaggaggcgataagtaa
DBGET
integrated database retrieval system