Lachnospiraceae bacterium KM106-2: lbkm_4080
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Entry
lbkm_4080 CDS
T08927
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lbx03110
]
lbkm_4080
Chaperones and folding catalysts [BR:
lbx03110
]
Heat shock proteins
HSP100
lbkm_4080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
Sigma54_activat
AAA_16
AAA_18
AAA_22
TniB
AAA_14
AAA_7
Zeta_toxin
nSTAND3
RNA_helicase
IstB_IS21
AAA_3
UVR
Torsin
NACHT
AAA_24
Clavanin
DNA_pol3_delta2
AAA_23
LUC7
DUF4355
Motif
Other DBs
NCBI-ProteinID:
BBF45318
LinkDB
All DBs
Position
4314490..4316940
Genome browser
AA seq
816 aa
AA seq
DB search
MQDRYTNGAREALNIATDVAYRLSHNYIGTEHLLIGLVSAKGVAAKVLQENGVEEEKIIE
LVNQLIAPNTKVAMMESDNFTPRAKRILLQSSKEATRLKSSLVGTEHILLALLKENDCIG
VRLLNTLGINVQKLYIDLLTAVGQDAGAAKNEYMVQKGKGKAKSSTPTLDQYSRDLTVYA
SEGKLDPVIGRDTEIQRVIQILSRRTKNNPCLVGEPGVGKTAIAEGLAEKIMEGNVPETI
KDKRLVTLDLSGMVAGSKYRGEFEERIKKVIEEVMNDGNILLFIDEIHTIIGAGGAEGAI
DASNILKPSLARGEIQIIGATTREEYRKHIEKDAALERRFQPVVIEEPSEEEAILILKGL
REAYEDHHKLKITDKAIETAVKMSSRYINDRYLPDKAIDIIDEAASKVRLSTYMDSPKMK
ELENQIADLEEQKEEAIKKEAYEKAGEIKQQQQEAKKALEELKDQFEQEKKEAKLQVTEN
NVADIVSSWTKIPVQKLEEEESKRLMQLEKILHQRVVGQEEAVAAVSKAIRRGRVGLKDP
NRPIGSFLFLGPTGVGKTELSKALSEAMFGTQSSMIRVDMSEYMEKHSVSKLIGSPPGYV
GYDEGGQLSEKVRQNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKVSFKNTII
IMTSNAGANRIVSPKLLGFASKSDEKQDYKRMKDGVMEEVKHVFKPEFINRIDEIIVFHS
LTKDDIQKIVGIMLDTINKRISAQMNITIKPDKRVLDHIVETSYDQTYGARPLRRALQTK
IEDPLAEEVLAGKIKPGDQVKLTLRKGEIAFSVKNV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatagatatacaaatggtgctagagaagcattgaacatcgctacagatgttgca
taccgtctgtctcataactacattgggacagagcatctgcttatcggattagtaagtgcc
aaaggggtagcagctaaagtattacaggaaaatggtgtggaagaagaaaagatcattgag
ttagtgaatcagctgatcgcaccaaatactaaggtagccatgatggaaagcgataatttt
acaccacgggcgaaaagaatcttactacaaagtagcaaggaagcgacaagactaaaatca
tctttagtaggaacagaacatattttattggcgttattaaaagagaacgattgtatcgga
gttcgcttattaaatacattaggtatcaatgttcagaaactatatattgatttacttaca
gcagtaggtcaagatgctggtgcagcaaaaaatgaatatatggtacaaaagggaaaagga
aaggcgaaaagttctacacctaccctagatcaatatagccgtgaccttacggtatatgcc
agtgaaggaaagctagatcctgttatcggtagagacactgaaattcagagagtaattcag
attcttagcagaagaacgaagaataatccatgtttagtaggcgaaccaggtgttggtaag
acagcgatcgcagaaggtcttgctgagaagatcatggaaggtaatgtaccagagacgatc
aaagataaacgtcttgttacgttagatttatcaggtatggtagctggaagtaagtaccgt
ggtgaatttgaagaaagaattaaaaaagtgatcgaagaagttatgaatgatggaaatatt
ctattgtttattgatgaaattcatacgattatcggtgcaggtggagcggaaggagctatc
gatgcatccaatattttaaaaccaagtcttgcacgtggagagattcagatcattggtgca
acgacaagagaagagtatcgcaagcatattgaaaaagatgcggcattagaaagaagattt
caaccagttgtgatcgaagaaccttcggaagaggaagcaattttaatcttaaaaggactt
cgtgaagcatacgaagatcatcataagttgaaaataacggataaggcgattgagacagct
gttaagatgtcaagccgctatatcaatgatcgttaccttccagataaggccatcgatatc
atcgacgaggctgcaagcaaagttcgtttgagtacttatatggattctcctaagatgaaa
gagttagaaaatcaaattgctgacttagaagaacagaaggaagaagcgattaagaaagag
gcttatgaaaaagctggagagattaaacagcagcaacaggaagcaaagaaagcactggaa
gaattgaaagatcaatttgaacaagaaaagaaagaagcgaaacttcaagtaacagaaaat
aatgttgctgatatcgtttccagctggacgaagattccggttcagaagttagaagaagag
gaatcgaaacgtctgatgcagcttgagaagatccttcatcaacgtgtggtaggacaagaa
gaggcagttgcggcagtgagtaaagcaattcgtcgtggtcgagtagggcttaaagaccca
aatcgcccaatcggttccttcttattcctaggaccaactggtgttggtaagacagaactt
agtaaagcattatcagaagcgatgtttggtacacagagcagcatgatccgagttgatatg
tctgaatatatggagaaacacagtgtatctaaattgatcggatcgcctccgggatatgta
ggatatgatgaaggtggacaacttagtgagaaggttcgtcagaatccatattctgttatc
ttatttgatgagattgagaaggcacatcctgatgtgttcaatattcttcttcaagtatta
gatgatggtcatattactgatgcacaaggaagaaaagtaagttttaagaatacgatcatt
atcatgacatccaatgcgggagcaaatcgtatcgtttcaccaaaactattaggatttgca
agtaagagtgatgaaaagcaagattataagagaatgaaagatggcgttatggaagaagtg
aaacatgtctttaagccggaatttatcaaccgtattgatgaaattatcgtcttccattcc
ttgacaaaagatgacattcagaagatcgttggtattatgcttgatacgatcaataaacgt
atcagtgctcagatgaatattacgatcaagccggataaacgagtattagatcatattgta
gaaacaagctatgatcagacatatggtgcaagaccactacgaagagcgcttcaaactaag
attgaagatccacttgcggaggaagtacttgcaggtaagattaaaccaggagatcaagtg
aaacttactttacgaaaaggcgagatcgctttctctgtgaaaaatgtctga
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