KEGG   Lachnospiraceae bacterium KM106-2: lbkm_4082
Entry
lbkm_4082         CDS       T08927                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
lbx  Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:lbx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbx03400]
    lbkm_4082
DNA repair and recombination proteins [BR:lbx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     lbkm_4082
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DnaB_C Lon_C AAA AAA_24 RecA Rad51 AAA_16 DUF7125 nSTAND3 AAA_14 AAA_22 IstB_IS21 SLFN-g3_helicase NTPase_1 GvpD_P-loop Zeta_toxin KTI12 AAA_5 ABC_tran MeaB PAXNEB KdpD TniB zf-RING_10 AAA_18
Other DBs
NCBI-ProteinID: BBF45320
UniProt: A0A7U6KJZ7
LinkDB
Position
4317539..4318891
AA seq 450 aa
MAKAKTVFFCKECGFESSKWLGQCPGCKQWDTFTEEKVGKATPASKAVRIGIVEPQPLSK
IATDESERLTTGIHEFDRVLGGGIVHGSLVLVGGDPGIGKSTLLLQMSKEMVDRGRNILY
ISGEESLKQIKIRAERLGTFKGELLLLSETNLDVIEESIKKVNPEVVVIDSIQTMFKEEI
GSAPGSVSQVREATAVLMRLAKGLGISIFIVGHVTKEGVVAGPRVLEHMVDTVLYLEGEN
QASYRILRAVKNRFGSTNEIGVFEMKSFGLSEVLNPSEFLLSGKPEGASGSVVACCVEGT
RPVLIEVQALVSQTYYNMPRRTAAGADYNRMNLLLAVLEKRMGIQLSSCDAYLNVAGGMR
ISEPALDLAIIVAIYSSFKNRVLDNKTIIFGEVGLAGEVRGVNMVEQRVGEAIKMGFDTC
ILPEVNKANLTNLPIRLIGIKNIRQLVNII
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggccaaggcgaaaacagtatttttctgtaaagagtgtggttttgaatcgtctaagtgg
cttggacaatgtccaggatgtaaacagtgggatacctttaccgaagagaaagtcggaaaa
gcaactccggcttccaaggcggtaagaatagggattgtagagccacagccgttatcaaag
attgcaacggatgagagtgaacgattgacaactggaatccatgagtttgatcgtgtgctt
ggtggcggtatcgtacacggttctcttgtactagttggtggagatccaggtattggaaaa
tccacattgcttttacagatgtctaaggaaatggtagataggggccgaaatatattatat
atatctggagaagaatcactaaagcagatcaaaatccgtgcagagaggttaggaaccttt
aaaggggaattacttcttcttagtgaaaccaatcttgatgtgatcgaagagagcatcaaa
aaggttaatccagaagtggtggtcattgactcgattcagaccatgttcaaagaagagatt
ggctctgcgccgggaagtgtgagtcaggttcgagaagcgaccgcagtattgatgcgttta
gcaaaaggacttggcatatcgatctttattgttggtcatgtgaccaaagaaggtgttgtt
gcaggaccaagagtcttagagcatatggtggatacggttctttatctggaaggagagaac
caggcatcttatcgaattcttcgagcggttaaaaaccgatttggatctacaaatgaaatc
ggtgtatttgaaatgaaatcattcggtctatcggaagtcttgaatccatcggaatttcta
ctaagtggaaaaccagaaggagcaagcggttcagttgttgcttgttgtgtagagggaaca
agaccagtattgatcgaggtacaggcgctcgttagtcagacctattataatatgccaaga
agaacagcagcaggtgctgattacaatagaatgaatctgctcttagcagtattggaaaag
agaatgggaattcagctatcaagctgtgatgcctatttgaatgtggctggtggaatgaga
attagtgagccagcattggatttggcgatcattgtcgctatttactctagttttaagaat
cgtgtcttagataataagacaattatctttggagaggtcggattggctggagaagttcgt
ggtgtcaacatggttgaacagcgggtgggagaagccatcaagatgggattcgatacttgt
atcctgccagaggtaaacaaagcaaacttaaccaatctgcctattcgattgataggcatt
aaaaatataaggcaattggtaaatatcatataa

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