Lachnospiraceae bacterium KM106-2: lbkm_4082
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Entry
lbkm_4082 CDS
T08927
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_4082
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
lbkm_4082
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA
AAA_24
RecA
Rad51
AAA_16
DUF7125
nSTAND3
AAA_14
AAA_22
IstB_IS21
SLFN-g3_helicase
NTPase_1
GvpD_P-loop
Zeta_toxin
KTI12
AAA_5
ABC_tran
MeaB
PAXNEB
KdpD
TniB
zf-RING_10
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BBF45320
UniProt:
A0A7U6KJZ7
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All DBs
Position
4317539..4318891
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AA seq
450 aa
AA seq
DB search
MAKAKTVFFCKECGFESSKWLGQCPGCKQWDTFTEEKVGKATPASKAVRIGIVEPQPLSK
IATDESERLTTGIHEFDRVLGGGIVHGSLVLVGGDPGIGKSTLLLQMSKEMVDRGRNILY
ISGEESLKQIKIRAERLGTFKGELLLLSETNLDVIEESIKKVNPEVVVIDSIQTMFKEEI
GSAPGSVSQVREATAVLMRLAKGLGISIFIVGHVTKEGVVAGPRVLEHMVDTVLYLEGEN
QASYRILRAVKNRFGSTNEIGVFEMKSFGLSEVLNPSEFLLSGKPEGASGSVVACCVEGT
RPVLIEVQALVSQTYYNMPRRTAAGADYNRMNLLLAVLEKRMGIQLSSCDAYLNVAGGMR
ISEPALDLAIIVAIYSSFKNRVLDNKTIIFGEVGLAGEVRGVNMVEQRVGEAIKMGFDTC
ILPEVNKANLTNLPIRLIGIKNIRQLVNII
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcgaaaacagtatttttctgtaaagagtgtggttttgaatcgtctaagtgg
cttggacaatgtccaggatgtaaacagtgggatacctttaccgaagagaaagtcggaaaa
gcaactccggcttccaaggcggtaagaatagggattgtagagccacagccgttatcaaag
attgcaacggatgagagtgaacgattgacaactggaatccatgagtttgatcgtgtgctt
ggtggcggtatcgtacacggttctcttgtactagttggtggagatccaggtattggaaaa
tccacattgcttttacagatgtctaaggaaatggtagataggggccgaaatatattatat
atatctggagaagaatcactaaagcagatcaaaatccgtgcagagaggttaggaaccttt
aaaggggaattacttcttcttagtgaaaccaatcttgatgtgatcgaagagagcatcaaa
aaggttaatccagaagtggtggtcattgactcgattcagaccatgttcaaagaagagatt
ggctctgcgccgggaagtgtgagtcaggttcgagaagcgaccgcagtattgatgcgttta
gcaaaaggacttggcatatcgatctttattgttggtcatgtgaccaaagaaggtgttgtt
gcaggaccaagagtcttagagcatatggtggatacggttctttatctggaaggagagaac
caggcatcttatcgaattcttcgagcggttaaaaaccgatttggatctacaaatgaaatc
ggtgtatttgaaatgaaatcattcggtctatcggaagtcttgaatccatcggaatttcta
ctaagtggaaaaccagaaggagcaagcggttcagttgttgcttgttgtgtagagggaaca
agaccagtattgatcgaggtacaggcgctcgttagtcagacctattataatatgccaaga
agaacagcagcaggtgctgattacaatagaatgaatctgctcttagcagtattggaaaag
agaatgggaattcagctatcaagctgtgatgcctatttgaatgtggctggtggaatgaga
attagtgagccagcattggatttggcgatcattgtcgctatttactctagttttaagaat
cgtgtcttagataataagacaattatctttggagaggtcggattggctggagaagttcgt
ggtgtcaacatggttgaacagcgggtgggagaagccatcaagatgggattcgatacttgt
atcctgccagaggtaaacaaagcaaacttaaccaatctgcctattcgattgataggcatt
aaaaatataaggcaattggtaaatatcatataa
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