Lachnospiraceae bacterium KM106-2: lbkm_4141
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Entry
lbkm_4141 CDS
T08927
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx02024
Quorum sensing
lbx03060
Protein export
lbx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
lbkm_4141
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
lbkm_4141
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
lbkm_4141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lbx02044
]
lbkm_4141
Secretion system [BR:
lbx02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
lbkm_4141
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
MMPL
Sec_GG
SecD_1st
SLATT_4
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
BBF45374
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Position
4371574..4373721
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AA seq
715 aa
AA seq
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MKNTKKGILQLLFIVVVIGALSTVALVGVGKNKIGSAKKIKLGLDLAGGVSITYQTQKSN
PTDTEMKDTIYKMQKRVENYSTESEVYQEGSDRINIDIPGEDDADAVLTALGKAGSISFV
DPDGKEVINGKHVKTATAQTINENGMKQYIVSLTLNSKGAKLFGEATTRLAPNRESISIV
YDGKTISSPAVQTAILDGKCQIDGQKSFEEADELASTIRIGALPIELKEIRSNVVGAKLG
SEAMSKSLLAGAIGFVLVLIFMVTVYRIPGLAASIALCLYIALELVLLQLLEVTLTLPGV
AGIILGIGMAVDANVIIFTRIKEELAKGKTVKSAIKVGFNKALSAIVDGNVTTLIAAGVL
YFKGSGTVKGFATTLAIGILLSMFTALTITKYVLKAFYALGADDVKYFGTARESKVINYT
GNMKKYLAISGCLILLGFAAMGYNGAKGNEILNYGLDFKGGTSSQVPMKDKITSDVKKDV
EKAYAKIIGYTPSISEVRGQNAFIIKTQTLKKDKREEVQQMLVKDFGVDKSKITTESISG
SVSDEMKQDAVIAVVISTICMLLYIWIRFKDINFGASAVLALLHDVLVVLMVYAVARISV
DSTFIACMLTIVGYSINATIVIFDRIRENISERMTEERLAEVVNRSISQTFSRSINTSLT
TFIMVFVLYIFGVDSLKDFALPLMAGIICGGYSSICITGTLWYTFKRKFGKLATK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatacaaaaaaaggtatactgcaactgttatttattgttgtagtaattggagca
ttatctacagttgccttagttggtgttggtaagaacaagataggtagtgcaaaaaaaatc
aagctaggccttgatttagctggcggtgttagtatcacgtatcagacacaaaagagtaat
ccaactgatacggaaatgaaagatacaatttacaagatgcagaaacgtgttgaaaactat
agtacagagtcggaagtttaccaagaaggtagcgatcgtatcaatatcgacattcctggt
gaagacgatgcagatgctgtattaactgcattaggtaaagctggatcaatttcatttgta
gatcctgatggcaaagaagttatcaatggtaagcatgtaaaaactgctaccgctcagaca
attaacgaaaatggtatgaaacagtatattgtttcattaacattaaattcaaaaggtgct
aaattatttggtgaggcaacaactcgccttgctccaaatcgtgaatcaatttctattgtt
tatgatggtaagacaatttcttcaccagccgttcagacagcaatcttagatggtaaatgt
cagatcgatggacagaaatcatttgaagaagcagatgaattagcttctacaattcgtatc
ggtgcacttccaatcgagttaaaagaaattcgttctaacgttgtaggtgctaaattaggc
tccgaagcaatgagcaagagtttattagctggtgcgatcggtttcgtacttgtattaatc
tttatggttacggtatatcgtattccaggtcttgctgcaagtattgcattgtgtttatat
atagcattagagttagtgttattacaattattagaagttactcttacacttcctggtgta
gccggtatcatacttggaattggtatggcggtagatgccaatgtcattatctttacaaga
attaaggaagaacttgcgaaaggtaaaactgttaagagtgcaattaaagttggttttaac
aaagcgttatccgctatcgtagatggtaatgttacaacattgatcgctgccggagtttta
tactttaaaggttctggtaccgtcaaaggtttcgctacaacattagcaattggtatttta
ttatctatgtttacagctcttacaatcacaaaatatgtattaaaagcattctacgctttg
ggtgctgatgatgtgaagtattttggtacagcaagagaatctaaggttatcaattacact
ggtaacatgaaaaagtaccttgctatttctggatgtttaatccttcttggatttgctgca
atgggatacaatggtgctaaaggtaatgaaatcttaaattatggtcttgacttcaaaggt
ggtacatcatctcaagtaccaatgaaagataagattacatcagacgttaagaaagacgtt
gaaaaagcatatgctaagatcatcggatatacaccttctatttcagaagttcgtggacaa
aatgcatttattattaaaacacagacattgaaaaaggataaacgtgaagaagttcaacaa
atgttagtaaaagacttcggtgtggacaagtctaagatcacaacagaaagtattagtggt
tctgtaagtgatgaaatgaagcaagatgcagttattgcagtagttatttctacaatttgt
atgttactttatatctggatccgattcaaagatatcaactttggtgccagtgcagtactt
gcattattacatgatgttttagttgtattaatggtatatgcagttgcacgtattagtgtt
gatagcacatttatcgcttgtatgttaacaatcgtaggttactctatcaatgcgacaatc
gttatcttcgaccgtattcgtgagaatatctcagaacgtatgacagaagaaaggttagct
gaagttgttaatagaagtattagtcagacattctctagaagtattaatacatctttaact
acatttatcatggtatttgttctttatatctttggtgtggattccttaaaagacttcgca
ttaccattgatggcaggtatcatctgtggtggttattcttcaatctgtatcacaggtaca
ttatggtacacatttaaacgtaagtttggaaaattagctacaaaatag
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