Leadbetterella byssophila: Lbys_0060
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Entry
Lbys_0060 CDS
T01350
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lby
Leadbetterella byssophila
Brite
KEGG Orthology (KO) [BR:
lby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lby03016
]
Lbys_0060
Enzymes [BR:
lby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Lbys_0060
Transfer RNA biogenesis [BR:
lby03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Lbys_0060
Prokaryotic type
Lbys_0060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6833
Motif
Other DBs
NCBI-ProteinID:
ADQ15856
UniProt:
E4RS40
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All DBs
Position
complement(71591..72271)
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AA seq
226 aa
AA seq
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MIEEYQAGQVLLIDKPLNWTSFDAVNKLKYAFKPHKIKIGHAGTLDPLATGLLVICVGKK
TKEIETYQGQKKVYTGKIMLGSTTPSFDLETEIDATYPTAHITKEGLEEARKSFLGTIAQ
IPPVFSAIKVDGKRAYESARKGDSVELKAREITIENFELDDTNFPELAFKVTCSKGTYIR
SLARDLGTALGSGAHLTALRREKIGEFDVKDALQVQEAVDKIKASL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgatagaggaatatcaagcgggacaggtgcttcttatagataagccccttaactggacc
agttttgatgcagttaacaaattgaagtatgcctttaagccgcataaaattaagattggc
catgccgggactttagatcctctagctacaggcttactggtcatttgcgtaggcaaaaaa
accaaggagatagagacttatcagggacaaaaaaaggtctatacaggtaaaatcatgtta
ggatctaccactccttcctttgatttggaaacggaaatagacgctacctaccctacggca
catatcactaaagaaggcttagaagaagcaagaaaatcttttttgggaactattgcacaa
attcctcctgttttttcagcaattaaggtggatggaaaaagagcctacgaatctgccaga
aaaggagatagtgtagaactaaaagcccgggaaattaccatagaaaatttcgagctggat
gatactaattttcctgaattagcatttaaagtaacttgctcaaaaggtacatatattcgt
agcttagccagagatttaggaacagctctaggtagtggtgcacatctcactgccttaaga
agagaaaaaattggagaatttgacgtgaaggatgccctgcaggttcaagaagcagtggat
aaaatcaaagcgagtctatga
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