Leadbetterella byssophila: Lbys_0129
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Entry
Lbys_0129 CDS
T01350
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lby
Leadbetterella byssophila
Pathway
lby03030
DNA replication
lby03430
Mismatch repair
lby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lbys_0129
03430 Mismatch repair
Lbys_0129
03440 Homologous recombination
Lbys_0129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lby03032
]
Lbys_0129
03400 DNA repair and recombination proteins [BR:
lby03400
]
Lbys_0129
Enzymes [BR:
lby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lbys_0129
DNA replication proteins [BR:
lby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lbys_0129
DNA repair and recombination proteins [BR:
lby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lbys_0129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADQ15925
UniProt:
E4RSS5
LinkDB
All DBs
Position
complement(153481..154392)
Genome browser
AA seq
303 aa
AA seq
DB search
MEFVTIDFETATAQRDSPCEIGLTFVQDGQIIDTKSWLIKPMYDEFDYFNILIHGIRPEH
VADKPEFNELWSEIKPLVENKFLIAHNAGFDISVLRRTLEAYQLPFPTLNYSCSYIFSKK
VWQGLPAYDLKTLCKVNNINLKHHRAGADSKATAELTLKAFEIAGVSSIDDFPEKLKTTV
GQLYNGGYKPAETKRIYKAKDLTKIEGDPTKHNTESIFYGRTVVFTGALSSMVRAEAQQT
IADIGGILGNGVTKETDFLVVGQQDYRVVGEDGMSSKQKKAISLIEKGSSLEILSEDDFL
KCL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgtaactattgactttgaaacagcaacagcacaacgtgacagtccgtgcgaa
ataggtttgacatttgttcaagacggtcaaataattgacacaaaatcttggttaattaag
ccgatgtatgacgagtttgactatttcaatattttaattcacggaataagacctgaacac
gttgcggacaaaccagagtttaacgaactgtggtcagaaataaaacctctcgttgagaac
aaatttttaattgctcacaatgcaggttttgacatcagtgttttaagaaggacacttgaa
gcatatcaacttccatttccaacattgaattactcttgcagttatattttttctaagaaa
gtatggcaaggacttcctgcttacgacttaaaaacactttgcaaagtaaataacatcaac
ctcaagcatcacagagcaggagccgacagtaaagcaacagcggaactgactttaaaggct
tttgagattgcaggagtatcttctattgacgatttccctgaaaaactaaaaacaacagtt
ggccaattgtataacggtggttacaaacctgctgagacaaagagaatttataaagctaaa
gacttaacaaaaattgaaggagaccccacaaaacacaacaccgaaagtattttctatgga
agaacagttgtgtttacgggagcattgtcatcaatggtaagagcagaagcacaacaaaca
attgcagacataggcggaattttggggaatggtgtaacaaaagaaacagattttttagtc
gttggacaacaagattatagagttgttggagaagacggaatgagtagcaaacagaaaaaa
gcaattagcctaatagaaaaaggttcttcacttgaaattttatccgaagacgacttttta
aagtgtttataa
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