KEGG   Leadbetterella byssophila: Lbys_2016
Entry
Lbys_2016         CDS       T01350                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lby  Leadbetterella byssophila
Pathway
lby02024  Quorum sensing
lby03060  Protein export
lby03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lby00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Lbys_2016
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Lbys_2016
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Lbys_2016
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lby02044]
    Lbys_2016
Enzymes [BR:lby01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Lbys_2016
Secretion system [BR:lby02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Lbys_2016
  Eukaryotic Sec-SRP protein
   Lbys_2016
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA CLP1_P KTI12 ATPase AAA_16 AAA_30 APS_kinase AAA_22 nSTAND3 cobW AAA_33 ParA ATP_bind_1 AAA_31 MeaB ArsA_ATPase AAA_17 6PF2K ATPase_2 KAP_NTPase NTPase_1 MMR_HSR1 TraI_hel_assoc_N FtsK_SpoIIIE Thymidylate_kin AAA_18 AAA_14 MobB ResIII DO-GTPase1 VirC1 NPHP3_N Helicase_RecD NACHT AAA_19 AAA
Other DBs
NCBI-ProteinID: ADQ17712
UniProt: E4RT04
LinkDB
Position
complement(2152392..2153708)
AA seq 438 aa
MFQSLQDKLNGAFKTLKGKGKITDINIASTVKEIRRALMDADVNYKVAKEVTDKVKQEAI
DRKVMIAVEPGQLFVKIVQEELTALMGGKAETVNLKGSPAVVLIAGLQGSGKTTFSGKFA
NYLKKQGKQVMLVAADVYRPAAITQLQVLGEQIGVDVYAEPENKDAVNIARNAVAEAKSK
GKSIVIVDTAGRLAVDEVMMTEVENIKKAISPSEILFVVDSMTGQDAVNTAKAFNDRLDF
DGVVLTKLDGDSRGGAALSIRAVVDKPVKFMSTGEKMEDLDIFHPDRMASRILGMGDVIS
LVERAQQAFDEDEARKLNKKMRENNFDLNDFLGQLEQIKKMGNLKDVMGMIPGMGAAIKD
VDISNDSFKPIESIIKSMTPKERSQPDIIDGSRRKRIATGAGRSIQEVNNLLKQFEQMKK
MMKKFNAMTPGGKARMFR
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgtttcaaagtcttcaggacaaacttaacggagcgtttaaaaccctaaagggtaaaggt
aagattactgatatcaacatcgccagtacggtgaaggagattcgtcgtgctttgatggac
gcagacgttaactataaagttgccaaagaagttacagataaagtaaaacaagaggccatc
gatcgtaaagtaatgatcgcggtagaacctggccaattgttcgtaaaaatcgttcaggaa
gaacttactgccctcatgggaggtaaggctgagaccgtcaatcttaaaggttctccggct
gtagtacttattgctggtcttcaaggttcgggtaaaactactttctcaggtaagtttgct
aactaccttaagaagcaaggtaagcaggtaatgctggtagctgctgacgtttatcgtccg
gccgccattacgcagttgcaagttttaggagagcagataggcgtagacgtttacgcagaa
cctgaaaacaaagatgccgttaacatagctcgtaatgctgttgctgaagcgaaaagcaaa
ggtaagagtatagtgattgtcgatactgctggtcgtcttgctgtagatgaagtcatgatg
acggaggtggaaaacatcaagaaagccatctctccttcagaaatcctatttgttgtggat
tccatgactggtcaggatgcagtgaatacggctaaagcatttaatgatcgactggacttt
gatggtgtggtcctcactaagttagacggtgactccagaggtggtgcggcgctctctatc
cgtgcagtagtagataagccggtgaagtttatgagtaccggtgaaaagatggaggatttg
gatatcttccacccggacaggatggcttcccgtattctaggtatgggtgacgttatatcc
ctagtggagcgtgcccaacaggcctttgatgaagacgaagcaaggaagttgaacaagaag
atgcgtgaaaacaacttcgacttgaatgacttcctgggccaattggagcagatcaaaaaa
atgggtaacctgaaagatgtcatgggtatgattccgggtatgggggcggctattaaagac
gtagatatcagcaatgattccttcaaacctatagagtctatcatcaagagtatgacgcca
aaagaaagatctcaaccggatatcattgatggtagtcgtagaaaaagaattgcaacgggt
gcaggtagatcaattcaggaagtgaataacttactgaagcaattcgagcaaatgaaaaag
atgatgaagaagttcaatgccatgaccccaggaggaaaggctaggatgttcagataa

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