KEGG   Leadbetterella byssophila: Lbys_3145
Entry
Lbys_3145         CDS       T01350                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lby  Leadbetterella byssophila
Pathway
lby03030  DNA replication
lby03430  Mismatch repair
lby03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lbys_3145
   03430 Mismatch repair
    Lbys_3145
   03440 Homologous recombination
    Lbys_3145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lby03032]
    Lbys_3145
   03400 DNA repair and recombination proteins [BR:lby03400]
    Lbys_3145
Enzymes [BR:lby01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Lbys_3145
DNA replication proteins [BR:lby03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Lbys_3145
DNA repair and recombination proteins [BR:lby03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Lbys_3145
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ADQ18806
UniProt: E4RV68
LinkDB
Position
complement(3550159..3550701)
AA seq 180 aa
MEFVAIDFETATAQKDSACAVGVVWVKGLDIIEEYYTLIQPPNNEYNFYNTKVHGIRARD
TENAPTFKDIYPKLKSILQGKKIVAHNSAFDKDVLYYTMLSAGLDYSELELPKKWDCTVK
IYRKKGLPKVNLAACSKLYGIDLTHHNALSDAMACAKLYMIHHHPLFSHVIPQKVALKAS
NT seq 543 nt   +upstreamnt  +downstreamnt
gtggaattcgttgcaatagattttgaaactgctaccgcacaaaaggatagcgcctgcgca
gtaggcgtggtctgggttaagggacttgacattatagaggagtactataccttgatccag
ccacccaataacgaatacaatttctacaataccaaggtgcacggtattcgcgcccgggac
acagaaaatgcccctaccttcaaagacatctatcccaaacttaaatctatactccagggc
aaaaagatcgtggcacataactctgcttttgataaagatgtgctctactacaccatgtta
agtgccggattagactactccgaacttgaactacccaagaaatgggattgtacggtaaag
atctatagaaaaaagggccttccaaaagtaaatcttgcagcctgctctaagctctacggt
atagaccttacacatcataatgccctttctgatgctatggcatgtgcgaagctttatatg
atccatcaccatcccctgttttcccatgtgatccctcaaaaagtggcgcttaaagccagc
tag

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