Leishmania braziliensis: LBRM_05_0140
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Entry
LBRM_05_0140 CDS
T01113
Name
(RefSeq) putative nucleolar RNA helicase II
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lbz
Leishmania braziliensis
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbz03009
]
LBRM_05_0140
03036 Chromosome and associated proteins [BR:
lbz03036
]
LBRM_05_0140
Enzymes [BR:
lbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBRM_05_0140
Ribosome biogenesis [BR:
lbz03009
]
Eukaryotic type
Pre-60S particles
Helicases
LBRM_05_0140
Chromosome and associated proteins [BR:
lbz03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
LBRM_05_0140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
Cas3-like_C_2
ERCC3_RAD25_C
ResIII
Motif
Other DBs
NCBI-GeneID:
5412809
NCBI-ProteinID:
XP_001561829
UniProt:
A4H460
A0A3P3YXN9
LinkDB
All DBs
Position
5:41125..43194
Genome browser
AA seq
689 aa
AA seq
DB search
MPRRAREESDEAKSHHTTKFTNSSDDDEPVKVSKTHTKASDHHNDIAAEKRQRTDESSKV
AAAAAATRAEVKDGEMPNNGCAATARPFSEFEMNPIVVKALQSRGIESMFPVQALTFNAI
MRNADVLVQARTGSGKTLAFGIPIVERLLKLQSHLTRGRGPAAVIFCPTRELAIQVQDVL
CGISCGLIVTALYGGVAYANQERVLRSGVDIVVATPGRAKDFLEKGTLHFDRVVMACLDE
ADHMLDIGFKDDIELLLSQVAEQNGSTSAEKTVHQTLLFSATVPEWVHTCSFIAKDKEFI
DMVGKEAVRTASTIKFYRRKCNFSEISSMLADLIKVYSGAHGRTLVFTNTKKDCHDLSIN
NTKLDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLPMVDLVIQCAPPSDI
DAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLPAPTREEILKAVARD
AAEDLARVERRATNLFMEQAAELLKDADPVEILASALAVMSGYTSNITTRGLITGTPGYV
TVQMTSDRPLPIPVYCSILRNNLGDDTFMRCRDITLLQDDPGCVFDVLEQFAESVMNTPM
RGITFQRIESLPPIIARELNSSRGGRGGFGNGGGYGGGRGGGRGGGRGGFSNGGGYGGSR
GGGRGGFSNGGGYGGSRGGGRGGGFQRRY
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgggcgcgcgaggaaagcgacgaggccaagtcgcaccacaccacgaagttc
accaatagtagcgacgacgatgagccagtgaaggtgtcgaagactcacaccaaggcgtcg
gaccaccacaacgacattgccgcagagaagcggcagcgcacagatgagagctccaaggtt
gcagcagcggcggcggcgactcgtgcagaggtgaaggacggagagatgccgaacaacggc
tgcgccgccacggcacgtcccttctcggagttcgagatgaacccaatcgtcgtcaaggca
ctgcagtcgcgcggcatcgagtcgatgtttcccgtccaagccctcaccttcaacgccatc
atgcgaaacgcggatgtccttgtgcaggcccgaaccggcagcggtaagacgctggcgttc
ggtatcccgatcgtggaacgtctcctgaagctgcagagccacctcacccggggtcgcggc
ccggctgctgtgatcttctgccccactcgcgagctggccatacaggtgcaggatgtactc
tgcgggattagctgcgggctcatcgtgacagccctatacggcggcgtcgcctacgcaaat
caggagcgtgtgctgcgcagcggcgtcgacatcgtcgtggccacccccggccgtgcgaag
gacttcctggagaaaggcacattgcattttgaccgcgtcgtgatggcgtgcctcgacgag
gctgaccacatgctggatatcggcttcaaggacgacatcgagctgctgctgtcgcaggtg
gcagagcagaacggctccaccagtgcagagaagacagtgcatcagacgctgctcttctcc
gcgacggtgccggagtgggtgcacacctgctccttcatcgccaaggacaaggagttcatc
gacatggtcggcaaggaggcggtgcgcacggccagcacgatcaagttctatcgccgaaaa
tgcaacttcagcgagatctcctcgatgctggctgacctcatcaaggtgtacagtggtgcc
cacggccgcacccttgtcttcactaacacaaagaaggactgtcacgacctctccatcaac
aacactaaactggactcgcagtgcctccacggggatatgcagcaggagcagcgcgagagt
accatgaagagcttccgagacaacaagttcagcgtcctcatcgccactgacgtggctgcc
cgcggccttgacctgcccatggtggacctcgtcatccagtgcgccccacccagcgacatc
gacgccttcattcaccgcgccgggcgtaccgggcgcgctggccgcaagggcgtgtgcgtg
ctgctctaccagccgcgcgaggagtacgttgtcgagcgcatcgagcgccacgcgaagatg
aagttcgacgttctgccggctcccacgcgtgaggagattctgaaggccgttgcacgggac
gccgctgaggacctggcgcgtgtggagcgccgtgcaaccaaccttttcatggagcaggca
gccgagctgctgaaggacgcggacccggtcgagatcctggcctcagcgctcgccgtaatg
agcggctacacgtccaacatcaccacgcgcggtctcattactggaacgccagggtacgtg
acagtgcagatgacgtccgatcgcccgctgcccattccagtgtactgcagtatcctccgc
aacaacctcggcgatgacacgttcatgcgatgccgcgacatcacactgctgcaggacgac
ccgggttgcgtgtttgacgtcttggaacagtttgccgagagtgtcatgaacacaccaatg
cgcggtatcaccttccagcgcatcgagtccctccccccaatcattgcgcgcgagctaaac
agcagtcgcggcggccgtggcggcttcggaaacggcggtggctatggcggaggtcgtggt
ggcggccgtggtggcggccgtggcggcttcagcaacggcggtggctatggcggaagtcgt
ggtggcggccgtggcggcttcagcaacggtggtggctatggcgggagtcgtggcggcggt
cgtggcggcggtttccagcgccgctactga
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