Leishmania braziliensis: LBRM_08_0720
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Entry
LBRM_08_0720 CDS
T01113
Name
(RefSeq) putative mitochondrial DNA polymerase beta-PAK
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBRM_08_0720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_08_0720
Enzymes [BR:
lbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBRM_08_0720
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
LBRM_08_0720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
LBRM_08_0720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
NTP_transf_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
5413077
NCBI-ProteinID:
XP_001562130
UniProt:
A4H5D5
LinkDB
All DBs
Position
8:complement(276109..280425)
Genome browser
AA seq
1438 aa
AA seq
DB search
MQSASSAVTASLTAQRRGVSSTTSASADAAATAASAVAAVAALSTGTKLRHRRGAHRKRG
RVSATAGVTLPPDVQLGDGKSGTCAVAIDPVVSTTVLVNPSKVSSEPLSQRAVKSSGLAA
RGACARTLGDVAGEAESPVVTTAAYLNGLGTSAEKPMACPPSAGEADAAEPALVASVAAT
DAAEMAAPRRKGRGRKPQRGANGGRTAVEAATEATVESLAVAAPAAASSPAVAAPLVEVS
AEAIAMAAAVSHVKPSRGLTKRRLRRREPGAAPAASAGDVEANEVKTAGVAVVPSATVGP
NRAPSVTADVGEGKGGTPVAESVSAAAPPLPPQHMDATCRAVTPDADAVEGGVSSRSSSR
RRIGRQRRQKSVGESVSAKGTEALQSNDEVSRAADVDGDRNHTSEDGSARQSGRRQRSSS
RTRGGKRLRATSPTADIGAVGKGAIAAAVAKSAAEGVKGTAEQAPVTGGATAGGATLASF
SLLTTATPPQPASKTTTTSLTTVDTKAPAAFTAELGSSESKTGADVELSAEAVGTTAASC
ASRGNRRPRGNRMKGRHLVSAAVTDGSGDTATAAAGPAATAAVENGETATTPPSAATVSS
ASVDSFKKLFATVDVAAVEAAKGLSSLAAKKRLAAQIIRRRWQLQRGLKLSPQTLPSTTT
STADEASTTAISAAAKDDEVAAAEAAAPTSSAPSSSPSSRRRLKRGKKSALTEAAVLSLT
AAELLPEKPARGGEAPAAGGVKPKSRTTKRGGKLGGSAAKRHGAGTTAIAAAASGAPVAE
LTKAAEVEDAVRDAEAEADVAAAMATAVELASRPEVVNDEFSLAPQTDDGAVADTTSIPH
SLAALVPSRASQKTKFYGAGDLKVTSGAKGSSSGSTGGSGNCAGGSSSSSSGSSGKAGKG
ANSKDTLFFPDYRERVVQLFEQLAQINSALGERFKSQSYGRTVEHLKRGDKVFQLLPPNL
LPLPEDDPEKKAAVEALYKDDSAAQRRRAEEVERNRAKRSLVLSPDNLIPGLGTKLREKV
IEILVTGGLEELHRQEAKPIIRAIRELTQVHGVGPRTAIDYFKKHDISTVAQLRDYAIKA
GELDMNNKDSGKPSNLVACSDKSKFHLNDAQRLGLVYYEDMCHRIPHDEGRLHEAFMKLR
MRKYLGKDYELVVCGSYRRQVESAGDIDVLITHKRSAAEGSSGDSSSGGRPLLPPSEVLG
TFLAGLKADKYIEATLAQGPTKFMGLCRLRAVENTSAAATTGKGKAAKAKNTARPKFRAR
RLDVRYVDSDGFPAAMLYFTGSKNFNVIMRSEAIKKHCILNEYGLFRKPTRRQMQQYGVL
QRNPNMTFHDMVTRLARFDLSAIKGGEDELTSEPSAVPADASTAAGSGAGSNADGASAKV
TAAAKKVKGKGREKTKQELAELREMARIVERQRVKASTEREIFEALGMDYVSPKDRSV
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgcttcgtcggcggtaacggcgtcgctgacagcgcagcggcgcggcgtttcg
agcacaacgagcgcatcagctgatgcagctgctaccgccgcttctgctgttgctgctgtg
gccgctttgtcaacagggacgaagctgcgtcatcgacgtggcgctcatcgcaagcgcggc
cgtgtctcggcgacggcaggggtcacgctgccccccgatgtgcagctcggggatggtaag
agtggcacctgtgctgtcgccatcgatcctgttgtgtcgacgactgtgttggtcaaccca
tcaaaggtatccagcgagccgctcagccaacgggcagtcaagagcagcggcttggcggct
aggggcgcatgcgcgcgcacattaggcgacgtcgcaggcgaggctgagtcaccggtggtc
actactgccgcatacctcaacgggcttggcacatcggctgagaaacctatggcgtgccct
ccgtcagctggcgaggccgatgctgctgagccggcgctcgtggcatccgtggcggctacc
gatgccgccgagatggccgcgcctcgtcgcaaagggagaggccgcaaaccacagcggggc
gccaacggaggccgcacagcggtggaggcggcgacagaggcgactgtggaatccctcgct
gttgctgctcctgctgccgcctctagccctgccgttgcggcaccattggtagaggtgtca
gcggaggccattgcaatggccgctgcggtctcgcacgtaaagccgtcgcgaggcctaacg
aaaaggcgcttgagacgcagggagcctggagccgcccctgccgcctcagctggcgacgtg
gaggcgaatgaggtgaagactgccggcgtcgcagtggtgccgtctgccactgtcggccct
aatcgtgccccttccgtgacagcagacgtgggtgaagggaagggcggcacgcccgtcgcg
gagtcggtaagtgccgcagcaccgcctctgcccccgcaacatatggacgccacttgtcgt
gctgttacacccgacgccgacgcagttgaaggaggcgtgagcagccgtagcagcagcagg
cgacgtataggtcgacagaggagacagaaatctgtcggggagtcggtgagtgcgaagggc
acagaagcccttcagagcaatgacgaggtcagtcgcgctgctgacgtggatggtgaccga
aatcacacgagcgaggacggcagtgcccgtcaaagtggccgacggcagcgatccagctcg
cgcacccgcggtggcaagcgcctgcgtgctacatcaccgacagctgacatcggggctgta
ggaaaaggcgccatcgctgctgccgtggccaaatcggccgccgagggcgtgaagggcacc
gcagagcaagcgccagtgaccggcggagcgacagcaggaggagcgacgttggcgtccttc
tcgcttctcaccacggcaacgcccccccagcctgcgagcaagaccaccaccaccagcctc
acgacggtggatacgaaggcaccagctgctttcaccgcggagctggggtcgtcggagtcg
aagacgggagccgacgtcgagctttcagcagaggccgtcgggaccactgccgcctcttgc
gcgtccaggggcaataggcggcctcgaggcaatcggatgaaagggaggcatcttgtctct
gctgccgtcacggatggcagcggcgacaccgccactgccgctgccggacccgccgcgacg
gcggcagtggagaatggggagacggcaacgacaccgccgtctgcagccactgtctcgtct
gcgtcggtggactccttcaagaaactcttcgccactgtcgacgtggcagccgttgaggcc
gcgaaggggctctcctctctcgccgcaaaaaagcgtctggctgcacagatcattcgccgt
cgctggcagctgcagcgagggctcaagttgtccccacaaaccctcccatccaccaccaca
tcaacagccgacgaggcaagcactacggcaatctcagctgcggcgaaggatgacgaggtg
gcagcagccgaagcagcggcacctacgtcgtccgcaccttcttcgtcgccgtcctcgcgc
cgacgcctgaagcgaggaaagaagtcagctttgactgaagcggctgtgctgtcactaacg
gcagctgagttgctaccggaaaagccggcgcggggcggcgaggcacccgctgcaggtgga
gtcaagccgaagagccgtaccactaaaaggggtggcaagcttggtgggtcggcggcgaag
aggcatggcgcgggcacgactgccatagcggcagcagcgtctggtgcacccgtggcggaa
ctgaccaaggctgctgaggtcgaagatgctgttcgtgacgccgaggcagaggcagatgtg
gcggcggcaatggcaaccgcggtggagttggcgtcaaggccggaggtcgtcaatgacgag
ttctcgctagcaccgcagacagacgacggcgccgttgctgatacgacgtcgataccccac
tctctcgctgccctcgtccccagccgtgcatcgcagaagacgaagttttatggtgcggga
gacttgaaggtaacttcaggcgcaaagggcagcagcagcggtagcactggcggatcgggg
aattgtgctggtggcagcagcagcagcagcagcggtagcagtggcaaggctggcaaaggt
gcgaactcgaaggacacgctgttcttccccgactaccgtgagcgcgtcgtgcagctcttt
gagcaacttgcccagatcaacagtgcccttggcgagcgctttaagtcgcagtcgtacggg
cgcacggtagagcatttaaagcgtggcgacaaggtgtttcagctgctgccgccgaacctg
ctgccgctgccagaggacgacccggagaagaaggcggcggttgaggcgctctacaaggac
gactcggcggcgcagaggaggcgcgctgaggaggtggagcggaaccgggcgaaacgcagt
ctcgtcctttcccctgataacctcattccaggtctggggacgaagctgcgggagaaagta
atcgagatcctcgtgacaggtggcttggaggaactgcatcggcaggaggcaaaaccaatc
attcgcgccatccgcgagctcacgcaggtgcacggcgttggcccacgcaccgccattgac
tactttaagaagcacgacatcagcaccgtcgcgcaacttcgcgactacgccatcaaggca
ggcgagcttgacatgaacaacaaggacagcggcaagccgtcaaatctggtggcctgctct
gacaagtccaagttccacctgaacgacgcgcagcggctcgggcttgtctactacgaagat
atgtgccaccgcatcccacacgacgagggccgcctacacgaggcattcatgaagctgcgc
atgcgcaagtaccttggcaaggactacgagctcgtcgtatgtggcagctaccggcgtcaa
gttgaatctgctggggatatcgatgtgctcatcacgcacaagcgcagcgcggcggagggc
agcagcggtgacagtagcagcggtggtcgtccgctgttaccaccgtcggaggtgcttggc
acgtttctcgctgggctcaaggcggacaagtatatcgaggccacgctggcacaggggccg
acgaagtttatggggctgtgccgcttgcgcgcggtggagaatacgtctgcagcagctact
accggcaagggaaaggcagcgaaggcaaagaatacagcgcggcccaagttccgcgcccgc
cgtcttgatgtccgctacgtggactcggacggctttccggccgcgatgctgtacttcacc
gggagcaaaaactttaacgtcattatgcgtagtgaggccattaagaagcactgcatcctc
aacgagtacggcctcttccgcaagccaacacgcaggcagatgcagcagtacggcgttctg
cagaggaacccgaacatgaccttccatgatatggttacccgtctcgcccgctttgacctc
tctgccatcaaaggcggcgaggatgaactcaccagcgaaccgtctgcggtgcccgctgat
gcttcgactgctgccgggagcggtgctggcagcaacgcagacggcgcgtcggcaaaggtg
acggccgcggccaagaaggtcaaggggaaggggagggagaagacgaagcaggagcttgcc
gagctgcgcgagatggcgaggattgtggagcggcagcgagtgaaggcgtctacagagcgt
gaaatcttcgaggcgctgggcatggactacgtctctccaaaagaccgcagcgtgtga
DBGET
integrated database retrieval system
