Leishmania braziliensis: LBRM_20_0330
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Entry
LBRM_20_0330 CDS
T01113
Name
(RefSeq) putative DNA-directed RNA polymerase III largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBRM_20_0330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbz03021
]
LBRM_20_0330
Enzymes [BR:
lbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBRM_20_0330
Transcription machinery [BR:
lbz03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LBRM_20_0330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
5414864
NCBI-ProteinID:
XP_001564320
UniProt:
A4HAF0
A0A3P3Z455
LinkDB
All DBs
Position
20_and_34a:111246..115991
Genome browser
AA seq
1581 aa
AA seq
DB search
MSHAVTTAAQFVQPLLDKPVEVTSIKYSLLSEDMIHRLSVMPCHRVIGTEKNFGVNDPRL
GPSDRLSVCNTCGQCSIECTGHAGHINLEVPVFHLGYFSAVIRVCRTICKRCSNVLLTRE
EMEYYLHRLRSTSHEPQQRAALIKAIQEDAYKTRVCLMCGGLNGTVRRVRPMRVIHEKYL
VELRRGEQANEDPTAFFQEALRSAALHNSEVGSHKEFVHEFLHPQRVKALFEAIPLEQVP
LLGLQPGTSPSSLLISTLLVPPVCVRPRGMSTTSHIREDDLTTQYNEILICSDMMNDGTN
DAARSVETWELLQTRVARLLDAALPGFPSHLRTTECKSYAQRMKGKQGRFRGNLSGKRVD
FSGRSVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVY
LSKECSRKSLRNARDREAIAARLSIGDVVERHVMNGDYVLFNRQPSLHRISLMAHRARVL
PFRTFRFNECCCAPYNADFDGDEMNIHVVQTEEARAEAKELLLSSHHIITAKNGEPIIAC
TQDFLTAAYLVTARDALFDRATFTQMVSHWLDAETQFALPIPAILKPAELWTGKQLFELI
LRPTPETQLLLNLEAKTRFYSGAGRHDDPAEGYVAFLDSIFLSGRLDKKLLGGGAKDGLF
ARLYALGGGEQTATCMSRIAQFTARYLQNYGFSLGLGDVSPTPSLSEKKAAVLAVSFDKC
DRLISLAKMGRLIPKPGMSVKQSLEAMLNAELSQVRDACGSAAVQALDAKSNAPLIMVNS
GSKGSALNTAQMMACVGQQTVSGKRIMNAFQDRALPHFPRFAEDPASRGFVASSFYSGLS
PTEFFFHGMAGREGIVDTAVKTAETGYIYRRLSKAMENLSVGYDTSVRSVQGSIVQLRYG
EDGMDPWLMEGSHGTPLNLAQEWLSSRAAYARFRNQIHSVMNERSRRGELAASTDPLLQN
YNKLYEEWHNVSMLPAELETFVHHLLHADEGTLTSCARLMEVEAAICGGAPSSAAAGLKL
LKELAQQHGSDRLRSDIQAFFRRKRDELVQLRQELKLPLDTHATVAAAAASPSAKAVRGG
AKRRSSPSDDVLPSTTAGAVQAFAESLQVELLPLTRGMLLRFFEDSARKVHRKLCEPGTP
CGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEIINANKNIATPVITAPILLE
DEFTSIDLASARRTQYQAARAVKGLMERVLLKEITREMVEVVTPRQYYIQIFLDIGLIER
LLLPIDAAVVCQRLYAAAARPMSPLRHLSEACVDMVSRDSLIVKPYEKDPARVHFNIQHL
LTLLPELVVGGIPGVNRVMIADRSEKLLAEGAELLSVMSLPYVDGVRTTCNHVAVVERVL
GIEAARETIVKEITSILQAYSLSIDIRHIYLLADVMTSRGVVLGITRYGIQKMNNNVLTM
ASFERTTEHLYNAAMTEREDVNLSVSECIIIGKPIPLGTSSFNILLDKGSIAPFGSNTGR
MPSSQASANAVATASPSPGKATAAGTHSKKVELTPKEVFLRSSFMAYASAHGAGRHRPLR
GGFSSRPLSAEGVFQLDLFTL
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgctgtcaccacggcggcgcagtttgtgcaaccgctgctggataagccggtg
gaggtgacctcgatcaagtacagccttctctctgaagatatgatccaccgcctctcagtc
atgccctgccaccgcgtgattgggaccgaaaagaacttcggtgtcaacgatccccgcctt
ggcccgagcgaccgcttgtcggtgtgcaacacctgtggccaatgcagcatagaatgcacg
ggccacgccggtcacatcaacctcgaggtgcccgtcttccacctcggctacttctctgct
gtcattcgagtgtgccggacaatatgcaagcgctgctccaacgtgctcctcacgcgagag
gagatggagtactatctgcaccgcctgcggtccacgtcccatgagccgcagcagcgcgcc
gcccttattaaagccattcaggaggatgcctacaagacgcgcgtgtgccttatgtgtggc
gggctgaacggcacggtgcgacgggtgcgcccaatgcgtgtcatccacgagaagtacctc
gtggagttgcgtcgcggcgagcaggcgaatgaggacccgacggcgttttttcaggaggcg
ttgcgctccgctgcgctgcacaattcggaggtgggctcgcacaaggagttcgtgcacgag
tttttgcacccgcagcgtgttaaagcgctgttcgaggcgattccactggagcaggtaccg
ctgctaggcctgcaacccggtactagcccaagcagccttctcattagcactttgctcgtc
ccgcccgtgtgtgtgcggccgcgcggtatgtcgacgacgagtcacattcgagaggatgac
ttgacgacgcagtacaacgagattctcatctgctctgacatgatgaacgacggcacaaac
gatgccgcacgtagcgtagagacatgggagcttctgcagacgcgtgtggcgcggttgctg
gatgcggcgctgccggggtttccttcgcacctccgcaccaccgagtgcaagtcctatgca
cagcgcatgaaaggcaagcagggccgttttcggggaaacctcagcggcaaacgtgtcgat
ttttctggacggtcggtcatttcgcctgacccaaaccttcgtattgacgagctcgccgtg
cctctgcgcgtcgcgcgtgtgctgacgtacccgcagcgcgtctttgctggtaacatccag
ctcatgcgccggctcgtgcgcaacggcccgcacgtacaccctggcgccctcacggtttat
ctctcgaaggaatgttcgcgcaaatccctgcgcaacgcacgcgaccgcgaggccattgca
gcgcgcctcagcataggcgacgttgtggagcggcatgtgatgaacggcgactatgtcctc
ttcaaccgtcaaccgtcgcttcaccgcatctcactcatggcacaccgagcgcgcgtcttg
ccgttccgtacatttcggttcaacgagtgctgctgcgcgccctacaacgccgacttcgac
ggcgacgagatgaacatccacgttgtgcagacagaggaggcccgcgccgaggcaaaggag
ctgctgctgtcgtcgcaccacattatcaccgccaagaacggcgagcccatcatcgcctgc
acgcaggactttctcaccgctgcctacctcgtgaccgcccgcgacgcccttttcgatcgc
gccaccttcacgcagatggtgtcccactggctggacgccgagacacagtttgcgcttccg
ataccagccatcctgaagccggcggagctgtggaccggcaagcaactcttcgagctcatc
cttcggccgacgccagagacacagctgctgctgaacttggaggcgaaaactcgcttctac
tctggcgctggcaggcacgacgacccggcagaggggtacgtggcattcctcgattccatc
tttctctctggtcgactcgacaagaagctcctgggtggtggcgccaaggacggcctcttt
gcccgcctctacgccctgggcggcggggagcagacggcgacgtgcatgtcgcgcatcgcg
cagttcaccgcccgctaccttcagaactacggcttctctcttgggctcggtgatgtgtca
ccgacgccgtcgctcagcgagaagaaggctgccgtgctagctgtgtctttcgacaagtgt
gaccgtctcatctctcttgccaagatgggccggctcatccccaagcctggaatgagtgtg
aagcagagtctagaggcaatgctgaacgctgagctgtcgcaggtgcgtgatgcgtgcggc
tcggccgccgtgcaagcgctggatgccaagtcaaacgcacctcttatcatggtgaactcc
ggcagcaaaggcagtgccctcaacactgcacagatgatggcgtgcgtgggccagcagacg
gtcagcggtaaacgcatcatgaacgccttccaggaccgagccctgccacacttcccgcgg
ttcgccgaggaccccgcgtcccgcggcttcgtagccagctccttttactctggcctgtcg
ccgacggagtttttcttccatggcatggccggccgcgaggggatcgtcgatacagccgtc
aagaccgcagagacaggctatatctaccgccgtctcagcaaggctatggagaacctaagc
gttggttacgacacctcagtgcgtagcgtacaaggcagcattgtacagctgcgatacggc
gaggacggcatggacccgtggctgatggaggggtcgcacggcacgccgctcaacctcgct
caggaatggctgagtagccgtgctgcctacgcccggtttcgaaatcaaattcactccgtc
atgaacgagaggagccgcaggggcgagctggccgcatcaacggacccgctgctccagaat
tacaacaagctctacgaagaatggcacaatgtgtcgatgctccctgcggagctggaaacg
ttcgtgcatcatcttctgcacgcggatgaggggacgctcacctcttgcgcgcgcctaatg
gaggtggaggcggcgatctgtggtggcgcgccgtcgtccgcggccgctggtctgaagctg
ctaaaagagctagcgcagcagcacggaagcgaccgcctgcgcagcgacattcaggcattc
ttccgcaggaagcgcgacgagctggtacagctgcgacaggagctgaagctacccctcgat
acccatgccaccgtggccgctgcagctgcgtcgccgagcgccaaagcagttcgcggcggt
gcaaagcgcagatcgagcccgtccgacgacgtgttgccgtcaaccaccgcaggtgcagtg
caggcgtttgcagagtcactgcaagtcgagctgctgccgctcacaagggggatgctgctc
cgctttttcgaggattcagctcgcaaggtgcaccgcaagctttgcgagcccggcacgccg
tgcggcgccattgccgctcagtctgtgggtgagccgagcacgcagatgacgctccgcacg
ttccactttgcaggcgtggccagcatgagcatcacgcagggtgtgccgcgccttgtggaa
atcatcaatgcaaacaagaacatcgccactccggtcatcacggcccccattctgttagag
gacgagttcacgtcgatagacctcgcctcagcgaggcgtacgcagtaccaagccgcacgc
gctgtgaaaggcctgatggagcgggtgctgttgaaggaaatcacacgcgaaatggtggag
gtcgtgacgccgcggcagtattacattcagatcttccttgacatagggctgatcgagcgc
ctgctgctgccgatcgatgcggcggtggtgtgccagcgtctctacgcggcggctgcgcga
ccaatgtcaccgctgcgccatctctccgaggcgtgtgtcgacatggtcagccgcgactcc
ctcattgtcaagccctacgagaaggacccggcgcgtgtacacttcaacattcagcacctg
ctaacgctcttgccggagctcgtggtcggtggcatcccaggcgtcaaccgcgttatgatt
gccgaccgctctgagaagctgctggcggaaggagcggagctcttgtcggtcatgtctctg
ccgtacgtggatggtgttcgcaccacgtgcaaccacgtcgctgttgttgaacgtgttctc
ggcatcgaggctgcccgcgagaccatagtgaaggaaattacgagcatcttacaggcctac
tcgctcagcattgatatccggcacatctacctcctggccgacgtcatgacgagccgcggc
gtggtgctcggcattactcggtacggcattcagaagatgaacaacaatgtcctcaccatg
gcgtcttttgagcgcaccacggagcacctgtacaatgcggcgatgacggagagggaggac
gtcaacctcagcgtctctgagtgcatcattattggcaagccgattcctctcggcaccagc
agcttcaacatcctgctcgacaagggcagcattgcgccattcggctccaatacaggacga
atgccatcgtctcaggccagtgccaatgcagtagccacagcgtcaccgtcgcccggcaag
gccacggcggccggcacgcatagtaagaaggtggagctgacgccgaaggaggtattcttg
cggagctcattcatggcttacgcctctgcgcacggggcggggagacatcgacctcttcgc
ggcggcttttcgagtcggccgctctctgccgagggcgtcttccagctggaccttttcacg
ttgtga
DBGET
integrated database retrieval system
