Leishmania braziliensis: LBRM_23_1670
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Entry
LBRM_23_1670 CDS
T01113
Name
(RefSeq) putative Csl4p homologue
KO
K07573
exosome complex component CSL4
Organism
lbz
Leishmania braziliensis
Pathway
lbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBRM_23_1670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbz03019
]
LBRM_23_1670
Messenger RNA biogenesis [BR:
lbz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LBRM_23_1670
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
LBRM_23_1670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
Motif
Other DBs
NCBI-GeneID:
5415813
NCBI-ProteinID:
XP_001565238
UniProt:
A4HD27
A0A3P3Z7F9
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Position
23:661714..662559
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AA seq
281 aa
AA seq
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MPVILHTGARVAPGDTIFTSPAAVTSSNDALEGGAAEEAEVVPREGCAVQYVERYVTPKA
LSLSAPSTVVERLIVATRHGIAQWDGPLVSVFPLTSSGRAEYAAARGTGAPPGSTVSSSR
HTVLGPRPGDIVHLRITRLNRLFAFGEVIAVNWRWCSHRSLSSAAAGGGGNNSGVFKGVL
RQEDIRPFKPSKDQLLPPPPSLSFGPGDVVLAEVISQSDVHQYQLSTISEGCGVVESFIT
TIEGRYGGQEKIKLEHIPGRRDAMMIRSTGEVVPRWCPLLP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcattctacacaccggtgctcgtgtcgcacctggcgacaccatcttcacctcc
cctgcggccgtgacgtcctctaacgatgccctcgaaggaggcgctgcggaggaggcggag
gttgtgccgagagagggttgtgcggtgcagtacgtagagcgatacgtaacgccaaaagcg
ctatccttgtcggcgccgtcgacagtggtggagcgcttgatcgtagctacccgtcacggt
atcgcgcagtgggatggaccccttgtgtcggtctttccccttacttcgtccggcagggcg
gagtacgcggcagcgcgcggcacaggcgccccacccggctctacggtctcgtcttcgcgg
cataccgtgcttggaccgcggccgggtgacatagtgcatctccgcatcactcgactgaat
cgtctctttgcctttggcgaggtcattgcggtaaactggaggtggtgtagccatcgcagc
ctctcctccgcggcagccggcggcggcggcaacaacagcggcgtcttcaaaggcgtcctg
cgacaggaggatatccgaccgttcaagccctcgaaagaccagctgctgccccctccgccg
tcgctgtccttcgggccgggagatgttgtgctcgccgaggttatttcacagtccgacgta
caccaataccagctcagcaccattagcgagggctgcggcgtagtggagagctttataact
actatcgaggggcgatacggcggtcaagagaagatcaagcttgagcatatacccgggcgt
cgcgacgccatgatgattcggagcacaggagaggtggtgccgagatggtgtccgctgctg
ccataa
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