Leishmania braziliensis: LBRM_24_1000
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Entry
LBRM_24_1000 CDS
T01113
Name
(RefSeq) putative replication factor C, subunit 1
KO
K10754
replication factor C subunit 1
Organism
lbz
Leishmania braziliensis
Pathway
lbz03030
DNA replication
lbz03410
Base excision repair
lbz03420
Nucleotide excision repair
lbz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBRM_24_1000
03410 Base excision repair
LBRM_24_1000
03420 Nucleotide excision repair
LBRM_24_1000
03430 Mismatch repair
LBRM_24_1000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbz03032
]
LBRM_24_1000
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_24_1000
DNA replication proteins [BR:
lbz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LBRM_24_1000
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LBRM_24_1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
AAA_22
Zeta_toxin
AAA_16
AAA_14
RuvB_N
AAA_28
AAA_5
nSTAND3
NPHP3_N
AAA_assoc_2
NTPase_1
RNA_helicase
AAA_7
AAA_18
AAA_17
AAA_19
Motif
Other DBs
NCBI-GeneID:
5415944
NCBI-ProteinID:
XP_001565365
UniProt:
A4HDF5
LinkDB
All DBs
Position
24:339089..341083
Genome browser
AA seq
664 aa
AA seq
DB search
MVTMSASSAADAAHPVTSRNELWADKYKPRSIAEMCYPVCANKLKAWLENFTPIGSPGDD
PKKPHGVLLSGSPGVGKTTTVYVVARELGRTVVEYNASDFRSRKSLRENVSDLINNRAFS
ARATSYTTVVLLMDEVDGCDIGGVGEVIEMLKSTRIPILCTCNDRWHPKLRSLLNYVEDM
RFSHPPCNVVANYLCDRVLAREGISLSKPLLQDIIKTSGSDIRSMLNNLQLWCLRRISLE
QRQLAECAAQSTKDSDAGLFDAAEYFLLQGTSRGERHSIAEMQARYYNADLVDMFVQENY
LHYNPQLVDGRDWMEAVSQAATSISRADAAQRIMYYEQNWSVSRFHVLSSSIAPCVYTRG
KYETFMTGQQKFFDMQRPVKFPTWLGHNSSANKNRRLLRCVAMQASHPAKGVSGNQEDVV
ADYMPHGWERPLTVPLATKGKDGIADVIASMDQYNLMRDDWDLVQTLPHYKHMQSPSSMA
PPVNITTAVKTAFTREFNKTHRFDSFAKSALKRGDEETQEDEEGGQGTGAGGNRKAGKVA
MDGVTVVSVTGNGAAVTKKKGKVAAGAATISTTAAATRKPRAKKSTPADGAARTTAKKAP
KSSTRVKAKASPATTNAKRKRARATSSESEEESMSSLSSASSSSAPSSSSSSSSSSSSDT
SDSE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgatgtctgcatcgtcggcggctgatgcggcgcaccccgtgacgagtcgcaac
gagctatgggcagacaagtacaagccacgctccattgctgagatgtgctacccggtctgt
gcgaacaagctgaaggcgtggctggagaacttcacacctatcggcagccccggcgatgac
ccaaagaagccgcatggtgtgctcctgtccggttctccaggcgtgggtaagacgacgaca
gtgtacgtggtggcacgggagctcggccgaacagttgtggagtacaacgcaagcgacttc
cgcagccgcaagtcgctcagggaaaacgtgtcggacctcatcaacaaccgtgcgttttcc
gcgagagccacatcgtacacaactgtggtgttgttaatggacgaggtggacggctgcgac
attggaggtgtcggcgaggtgattgagatgctcaagtcgacccgcatcccgatcctgtgc
acctgtaacgatcgctggcaccccaaactgcgctcgctgctcaactacgtggaggacatg
cgctttagccacccgccgtgcaatgttgtggcgaactacctgtgtgaccgtgtcctggca
cgcgaaggtatttcgttatccaagccgctcctgcaagatatcatcaagacctccggaagc
gatatccgcagcatgctcaacaatctgcagctctggtgtctgagacgcatctcgctcgag
cagcggcagcttgccgagtgcgccgcgcagtcgacgaaggacagcgatgccggcctcttc
gatgccgctgagtacttcttgctgcagggcacgtcgcgtggagagcggcactccatcgct
gagatgcaggcccgctactacaacgccgacctagtggacatgtttgtgcaggagaactat
ctgcactacaacccgcagctggtggatgggcgggattggatggaggccgtctcgcaggcc
gccacgtcgatctcgcgcgcggacgcggcgcagcgcattatgtactatgaacaaaattgg
tccgtatcccgcttccacgtcctgtcctccagcattgccccgtgtgtgtacacgcgcggc
aagtacgaaaccttcatgacagggcagcagaagttcttcgacatgcagcggcccgtgaag
ttcccgacgtggctcgggcacaactcctccgcaaacaagaaccgccgtctgctgcgctgt
gtcgccatgcaggcgtcacacccggcgaagggtgtgtcgggaaatcaggaggacgtggta
gcggactacatgccgcacggctgggagcgtccactgacggtgccgctggcaacgaaaggg
aaggacggcatcgccgacgtcatcgcctctatggatcagtacaacctcatgcgcgatgac
tgggacctcgtgcaaacgctgccgcactacaagcacatgcagtcgcccagctccatggcg
ccgccggtgaacatcaccaccgccgtcaagaccgccttcacacgtgagttcaacaagacg
catcgctttgacagcttcgcgaagagcgcgctaaagcgcggcgatgaggagacacaagaa
gacgaagagggcggacagggaaccggcgccggtggcaatcgcaaagctgggaaggtggcc
atggacggtgtaacagtcgtgagcgtcacgggcaatggcgctgctgtcacgaagaagaaa
ggcaaagtggctgctggcgctgccaccatctctacgacggcagccgcgacacgcaagcca
cgggccaagaagagcactccggctgatggtgctgccagaacgactgcaaagaaggcgccg
aagagctcgacgcgggtgaaagccaaggcatcaccggcgacaacaaacgcgaagcgaaag
cgcgcgcgcgcgacttcctcggagagtgaggaggagagcatgtcgtcattatcctcggcg
tcctcctcgtctgcaccctcttcgagcagcagcagcagcagcagcagcagcagtgatacc
tccgacagtgagtaa
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