Leishmania braziliensis: LBRM_24_1330
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Entry
LBRM_24_1330 CDS
T01113
Name
(RefSeq) putative ATP-dependent DEAD/H DNA helicase RecQ
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03440
Homologous recombination
lbz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBRM_24_1330
03460 Fanconi anemia pathway
LBRM_24_1330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbz03032
]
LBRM_24_1330
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_24_1330
Enzymes [BR:
lbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBRM_24_1330
DNA replication proteins [BR:
lbz03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
LBRM_24_1330
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
LBRM_24_1330
Bloom's syndrome complex (BTR)
LBRM_24_1330
FA (Fanconi anemia) pathway
LBRM_24_1330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
Choline_kin_N
Motif
Other DBs
NCBI-GeneID:
5415977
NCBI-ProteinID:
XP_001565398
UniProt:
A4HDI8
LinkDB
All DBs
Position
24:complement(454388..460483)
Genome browser
AA seq
2031 aa
AA seq
DB search
MPTSTSLSSASTSAAAAGNLDNNGNRVSSSSATIYPALASRMSPPYLTNESEWLSALTSA
VQRSLEGGVGSRSNGNNGGAWSQTHPNQGTPQDVAMRAARDTAPPLAEYQAVYQQYCLHC
TSLVPAPPPARLYPALGGSIGDGGCGNLNSGGSSTANNNNSNFSVASYAPPPPPSLTHSP
AAAPGVRQQRVTTRSSIMPATAASFPISSLRNSGVGELVGSSPAGGTTAVCSSSLLPTMP
PPAASRGGCSMVPPAASSALVAPCMAPSPLTLQDVKAEMRLVAKQLREAQHHRDDLVLLE
DEEHDPSDELQQLDVRIAELEQRFARFRVTQATLLNRPTSTSTPSSLSSMPSSLVQLPRS
PSVIGLGCANYSSAYGPGIGSSTGAMGYPGGSEQRDPLMQSTIPLPWPAAPSSGTATPAG
AAGAPPHGGWLTTMTEHSVNHSGIGDCSPALTGQWDTSVNGGSPSFSSAEYSIPSARKGF
SWEVYEQQMDPEALSRDALSRTAHVELPINPTHQYGGERFPWSTELRRMMREVFGLHDYR
FCQLEIMNACMDGRDVFVLLPTGGGKSLCYQLPALMPNPAQVTVVVSPLISLIQDQVYAL
IANDIPAMALTGQTNDAARRSLFQEWASGHVVHTLVYVTPEYFGRSDHFVGTLQGLTDKG
LLCRFVIDEAHCVSQWGHDFRPDYRKLSVLKRQFPRTPITALTATATDVVQQDVIKTLAL
RNAIIFKGSFNRANLKYSVQHVRGKQVVSVVEDLILHRFSPSWCGIVYCLSRKDCEEMAA
ALVRRGIKASYYHSEAASKNERQERWTRDELQVICATIAFGMGINKPDVRYVVHAAMPKS
IEGYYQESGRAGRDGLPSECVLLSTTTDRQRQERLIHGSKDWRASLTSLHRMLAYTLNDV
DCRRRQQLHHFGEQVDVHFCLTQRAAAGGGAVPALPPTSVASASAVTQLCDNCASKLAEG
WTVKEVNVSNILLDLYAIVLRLGAMTSKQLIGVYRGSVSDMGRAVEMRMRVKGTPAEYKG
GAKQSKVLLERTLLEGMQLGLFEERLDSINDFAVCAFVELGGTPTAQQLHCDIKAEHRVV
TVRLRGEKTRSDRGDAIFDAVSAAPETFSPGRIAAVATTAALAVEGGGKRRDAVVSAVSG
AISRDDLPLFELFDGTRRQAAVGDGSGTRGLLAAQDAKKRKPKPLKGRRGGGYVLDEADG
STDGDEGVISSIEEDSALSNSMASFINDESSSSGVATPFNISSATTPQRDGAGAALADAG
RRQRTLSSGGSQDGVISTLSEDTQAQAQVHQPPRKRTRGDAVDQRAVLAQRGLRSAVTAA
TPASTVPAARLERLKVLLQEEMDRLVQTLVSQAVGCRSYNVMPKSTILRLTETLAIPGWG
SVADLIDLEGMGKSKVKRYGADILRVYRHFRYIHIGDVEELSEAESAEVKDMKTVVRPRN
RLGRANASAGELIVDNDGEGGCSGDGDRLPSTATPGFVGGMSIEAASTNALATYQPAQRP
MLLDTATPEKARASISSSAGTPSRDGGSGVKLPGTVGDQQRQRRTTFTFSSTTAAAPAAV
PISVNVRPSSPWLSLQGPVGCAGAPPLPPQANAAAAANRIADIYDQLTCDPSVANAHDNT
ILTAASAVAAALPPHEPHPPPTPPMPQFSVPLFPEPPAWQAPPSTVAVAAAGVSWGTPAP
PPPPPPHNNIAGGNGHLFSPSASSTSASVLLAGSGLPMGQRPRPQVPQQPFTMMAQTVYS
HALASGDPSLADTLRSGSHAGASHATDNSELLIGSSPIPTQQHQQRHAYFFNGQSVPQAL
SGGGVETGEGQRSSNGVVLLGSDELTQAPSIPRPSTALGLGDLSASSLTHGSRGAAAAAT
AGHVRDAPSPSRQPEAKDMHSVDYLMGLCNDARFRTPLSGRLSDLVTCGAGGPSRSAIPA
PTLDTVYSSGAATANTGHAVSHPLPYHTARGKSLGSGSTLFSPGAETPISSAEGPLFQSS
TPGSVPQPQLQKLYQQRQSQPSKQEDGAAAGGNNGADRDGQEVYTIEDDSE
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atgcctacatcaacgtcactgtcatccgcatcgacttcagcagcagctgcaggtaacttg
gacaacaatggcaatcgcgtcagtagcagcagcgcgactatctaccccgctctcgcttct
cgcatgtccccaccgtacctcacaaacgagtctgagtggttatcggctctcacctctgcc
gtgcaacgcagcctcgaaggcggtgtggggagtcgcagcaatggcaataacggcggcgca
tggagtcaaacacacccaaatcagggcaccccccaggatgtggcgatgcgtgccgcccga
gacacggcgcctcccttggcggaataccaggctgtatatcagcagtactgcctccattgc
accagtcttgtcccggcgccccctccggcccgcttatatccggctctcggcggcagtatt
ggtgatggcggctgcggcaacctgaacagtggcggcagcagtactgccaacaacaacaac
agcaacttctccgtcgcctcctacgcgcctcctccaccgccgtctctgacacactcaccc
gctgctgcgccaggggtgcggcagcaaagagtaacaacgcggagctcaattatgcccgcc
actgccgcgtcatttcccatctcctctctccgaaactcaggcgtcggtgagctggttggg
tcgagtcccgctggcggtactactgctgtttgctcgtcttccttgcttcctaccatgcca
ccccctgctgcgtccagaggtggatgctccatggtccccccggctgcttcttcagctctc
gtcgctccgtgcatggcgccgtcaccgctgacgttacaggacgtgaaggcagagatgcga
ctcgtcgccaagcagcttcgcgaggcgcaacaccaccgcgatgacctcgtgctcctcgag
gacgaagagcacgacccctcggacgagctgcaacagctggatgtgcgcattgcagagctc
gaacagcggttcgcccgtttccgcgtcacccaagcgacgctgctgaacaggcccacctcc
acctcgacgccgtcctccctctcctccatgccgtcctcgctcgtgcagttaccgcgcagc
ccatcggtgattgggctcggctgtgcgaactacagcagcgcgtacggcccaggtatcggc
agcagcactggagctatgggctaccccggcggcagcgagcagcgagacccactgatgcag
agcactataccgttgccttggcccgctgcgccgtcaagcggcaccgctacaccagcaggt
gctgcgggtgcaccaccacatggtggctggctcaccaccatgaccgagcacagcgtaaac
cacagcggcatcggtgactgttccccggcactgacgggtcagtgggacaccagcgtcaac
ggtggctcgccgagcttcagcagtgccgagtactcgattccctcagctcgaaaaggcttc
tcgtgggaggtttacgagcagcagatggacccggaggcgctgtcgcgcgatgccctgtct
cgcaccgcgcatgtcgagctccccatcaaccccacgcaccagtatggaggcgagcgcttc
ccgtggtcgacggagcttcggcgcatgatgcgcgaggtgttcggcttgcacgactaccgc
ttctgtcagctcgagatcatgaacgcgtgcatggacggccgcgatgtttttgtgctactg
ccgaccggtggcggcaagtctttgtgctaccaacttcctgcgctgatgcccaacccggcc
caggtcaccgtagtcgtgtcgccgctcatctcgcttattcaagatcaggtgtacgcgctg
atcgcaaatgacatccccgccatggccctcaccgggcagaccaacgacgctgctcgccgc
agcctcttccaggaatgggcctccggccacgtcgtgcacacgctcgtgtacgtgacgccg
gagtactttggtcgcagcgaccactttgttggcacgttgcaggggctcaccgataagggg
ttgctctgccgctttgtgattgacgaggcgcactgcgtgtcacagtggggccacgacttc
cggccagattaccgtaagctctcagtgttgaagcggcagtttccacggacgcccatcacg
gcgctgaccgccacagcgacggatgtcgtgcagcaggatgtgatcaagactcttgccctt
cgcaacgccatcatcttcaagggctccttcaaccgagccaatctcaagtactcggtgcag
cacgtgcgaggcaagcaggtggtctcggttgttgaggacctcatactgcaccgattctcg
ccgtcgtggtgcggcatcgtgtactgcctgtcgcgcaaggactgcgaggagatggcggcg
gcactcgtacgcaggggcatcaaggcctcctactaccactccgaggcggcgtcgaagaac
gagcggcaggagcgatggacacgtgatgagctgcaagtgatttgcgccacgattgccttt
gggatgggcatcaacaagccagatgtccgctacgtcgtgcacgcggctatgccaaagtcc
atcgaggggtactaccaggaaagcggccgcgccggacgtgatggtttgccgtcggagtgc
gtgctgctgagcaccaccacggatcgccagcgccaggagaggctgattcacggctcgaag
gactggcgcgcgtcgctcacatcgctgcatcgtatgctggcatacaccctcaacgacgtc
gactgtcgccggcgtcagcagctgcatcactttggtgagcaggttgacgtccatttctgc
cttacacagcgtgccgccgctggcggcggtgcggtgcccgcgctgccaccgacgtcggtc
gcatcagcgtctgccgtcacacagctgtgtgacaactgtgccagcaagctggcagagggc
tggacagtgaaggaggtgaatgtgagcaacattctgcttgacctgtacgccatcgtcctg
cgcctcggcgcaatgacgtcgaagcagctgattggcgtttaccgcggctctgtctcggat
atggggcgcgcggtggagatgcgcatgcgcgtgaagggaacgccggcggagtacaagggc
ggcgccaagcagtccaaggtactcctagaacgcacgctgctggaggggatgcagcttgga
ctgttcgaggagcggctggacagcatcaatgacttcgccgtctgcgcctttgtggagctt
ggcggaaccccaacagcacagcagctccactgtgacatcaaggctgaacaccgggtcgta
acggtgcgtctgcgaggagagaagactcgcagcgacagaggagacgccatcttcgacgca
gtgtctgcagcgccggagactttttcccccggtaggattgctgcagttgctaccactgcc
gctctggccgtcgaaggcggcggcaagcggcgtgatgctgtggtcagtgctgtttctggc
gccatctccagggacgaccttcccctcttcgagctgtttgacggtacccgaagacaggca
gccgtgggcgatggcagcggcacacgaggtttattggctgcgcaagacgcgaagaagcgc
aagccgaaaccactgaaggggcgccgtggcggcgggtacgtactggacgaggcagacggc
agcaccgatggcgacgaaggtgtgatctcatccatcgaggaagactctgcattatcgaac
agcatggcgtccttcatcaacgacgaaagcagcagcagcggcgttgccaccccattcaac
atctccagtgcgacgacgccgcagcgcgatggggccggggcagcattagccgatgctgga
cgccggcagcgcacgctatcgagtggagggtcgcaggacggcgtcatctcgacgctgtcg
gaggacacacaagcccaggcgcaagtgcatcagccgccgcggaagcgcactcgcggtgac
gcggtcgaccagcgagcggtcctggctcagagaggcttaaggagcgctgttacagccgcg
actccggcgtcgactgttcctgcggcgcggctggagcgcctgaaggtgcttctgcaggag
gagatggatcggctcgtgcagaccctcgtgagccaggcggtggggtgtcgcagctacaac
gtgatgcccaagagcacgattctgcggctgaccgagacgctcgctattccaggctggggc
agcgttgccgacctcattgacctggaggggatgggcaagagcaaggtgaagcggtacggg
gctgacattctgcgggtgtaccgtcatttccgctacatccacattggcgatgtcgaggag
ttgtcagaagcggagtcagcggaggtgaaggacatgaagacggtggtgcggccgcgcaat
cgcctcggccgcgcaaacgcctccgctggtgagttgatcgttgataatgacggggagggg
gggtgcagtggtgatggcgaccgacttccaagcacagccacgcctggatttgtaggtgga
atgtccatcgaggcggcatcgacaaacgcccttgcaacctatcagccagcacagcgcccg
atgctgctggatacagccacacccgagaaggcgcgtgcatcgatctcttcgtccgccgga
accccatcgcgcgacggcggcagcggtgtgaagctgccaggaaccgtcggtgaccagcag
cgacagcggcgcaccacgtttactttttcgtcgacgacggctgccgctcccgcggcggtg
cccatcagcgtcaacgttaggccatcctccccatggctgtctctgcagggcccagtgggg
tgcgcaggcgcaccgccacttccaccgcaagcaaatgccgctgccgcagcgaaccgcatt
gcggatatttacgaccaactcacgtgtgacccatcggtcgccaatgcacatgacaacacg
attctcacggctgcctccgctgtagcagccgctctaccgccgcacgagccgcatcctccc
cctactcctcccatgccgcagttctccgtgcctctctttccggaaccgcctgcgtggcag
gcgccgccttccactgttgctgtcgctgctgctggcgtatcatggggcactccagcgccg
ccgccgccgcctccaccccacaacaacatcgccggtggaaacggccatctgttttctccc
agcgcgtcctctacatctgcctcggtactcctggctggctcagggcttcccatgggccag
cgaccgcgtccacaagtgcctcagcagccgttcacgatgatggcccagacggtgtattct
catgccttggcgtccggtgaccctagcctggcagacacacttcgaagcggtagtcacgct
ggcgcttcacacgccactgataacagcgaactgctgattgggagcagccctattcctacg
cagcaacatcagcaacgccacgcatacttcttcaacggtcaaagcgttcctcaggctctc
agtggaggcggggtagagactggtgaggggcagaggagtagtaacggcgtggtgctgctc
ggctccgacgagcttactcaggcgccctcgataccgcgcccgtcgacggcgctcggtctc
ggcgacctctccgccagcagccttactcacggcagtagaggagctgcagcggcggcgacg
gcgggtcacgtgcgcgacgcaccgtcgccatcacggcagcctgaggcaaaggacatgcac
agcgtggattacttgatgggcctatgtaatgacgcgcggttccgcacgccgctgagcggg
cgactgtctgacttggtaacttgtggcgctggaggcccctcccgatccgcgattccggca
ccaaccctcgacaccgtttattccagtggtgcggcaacagcgaacaccggccatgctgtg
agccatccacttccctaccacacagcgagaggaaagtcgctcggcagtggctcgacgttg
ttctcgcctggtgctgagacaccgatctcttccgcagaagggccattgtttcagtccagt
acaccagggtctgtcccacagccgcaactgcagaagctgtatcagcagcggcagtcgcag
ccgtcgaaacaagaggatggcgcggcggcgggtggtaataatggcgctgaccgcgacggg
caagaggtctacaccatcgaggacgactcggagtag
DBGET
integrated database retrieval system
