Leishmania braziliensis: LBRM_24_1460
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Entry
LBRM_24_1460 CDS
T01113
Name
(RefSeq) putative mismatch repair protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
lbz
Leishmania braziliensis
Pathway
lbz03430
Mismatch repair
lbz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LBRM_24_1460
03460 Fanconi anemia pathway
LBRM_24_1460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_24_1460
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
LBRM_24_1460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
5415990
NCBI-ProteinID:
XP_001565410
UniProt:
A4HDK0
A0A3P3Z810
LinkDB
All DBs
Position
24:complement(516952..521058)
Genome browser
AA seq
1368 aa
AA seq
DB search
MGCIHKLTDDVINRIAAGEVVQRPSAALKELLENSIDAGCNRVQVVAAEGGLEVLQVSDD
GSGIHKEDLPLLCERYATSKLQTFEDLHRVTSFGFRGEALASISYVSRVTVTTRRHQACD
EASDGAPSACAHALSTAGAAVAWRCQYLNGALLGDPQPCAGNPGTTIRVEKLFYNTLVRR
RSLRASEEWGRIVDIVSRYALAFPAVGFTCHREKAYRGASGGGVSSTGSLSRLGGGGSGS
NATSATANAGGSGAGGLCFPPRSSTRQNIRLSHGTQLASHLRLVYAYNVGTATTLPCGPE
PDTGFEPLGSELEEGGGALSAGDESGLLSAPPSASSFTKELSPSLSAASRHSAAREARVF
AQMELRARRVRATSGPAGEGLFTLVGYTSDPTLTQRKSYLCVFINQRLVESAAIRKAIDA
VYNGVLTGGNRPFTVLLLSVPTDRVDVNVHPTKKEVCLLDEELIVLRVAEVCRGAVLEAA
AARQMDMLKMRHTAALALKQELPSADGVGAADNSATAELSGSSSQHILEKLREQHQRGTP
LASPLTSSSLTSKAATAPVGTGVGGGPSVVAAPCTVVRVEPQRGALDKYFSQRLAAGAAP
PAAAATVSAPLSSPSHSSLLPATQATPSQVSVDYRLRAQAKAALKSEDRRQDSVSHLARR
GDVANDEPQTTPGYEAPLWETVMASLPGQQAPATTAVVTTDADDSHGPPFVSPSPEAVHS
GERDDDTAVHTIRAYREAADKGDEGDPRLAVPAVVQMTKKYIDSKVDGGTDSVRARTELL
SEESAVDSGDEDEDDGMREFKRYRHEVHERAQLLQRAAGVAAAAASMSKSAVLHKESFAA
ARSPSTHVGSPPATKAEKAQLAMAHLGAVVRAADMLRREAAAENASNFVHAVASDEESDV
DKEKIQPGTSPSGASPGATASLVNVAEVPAPVLLSSVSIIVDRILADASPTADNLVGQLS
FVGAVDSRAFLAQAGTTLLWCDTMALVRHAVFQRIFLRWGQPALPAPPVLVFTTPIRLAD
LLLLALAYDGPHLQPPSVTLLAVVDECMKKQRSVSIGSDATQRAETALTADAVRRMGGVT
ALAWRQLLFKADLEHSTLSYADLPTESGADGAFAASASALPQPEGATMRYVRRLVRRLCR
WRALLKEYFYIDITADGLLVGLPYGLNRHWPPRMRAVPVMVWLLAEAVPYPGVAALSSSG
MSDAADQMSSTGAPWQSGKGRGAEKAVTCVAASTSVATSLAPTQTEVTLTTTPQPTAMEA
EADGVAQEVACFTAVARHIAAALYGLPPPPPSTLSPSAEGPTVATADVATGATDMASVEL
WREELVQHGLFPCLKNPQLFCLPDHCMRDGTIQSLVSVESLYKVFERC
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcattcacaagctcaccgacgacgtgatcaaccgcatcgctgccggtgaggtg
gtgcagcggcccagcgcggccctaaaggagttactggagaactcaatcgatgcggggtgc
aaccgtgtgcaggtcgtggcagctgaaggtgggctcgaggtgctgcaggtgagcgatgac
gggagtggcattcacaaggaggacctaccgctgctgtgtgagcgctatgcgacgagtaaa
ctgcagactttcgaggacctgcatcgggtcacctccttcggcttccgcggcgaggctctc
gcatccatatcgtatgtgtcacgcgtcacagtgactacacgtcgccaccaagcgtgcgac
gaggccagcgatggcgcgccttctgcatgtgcgcacgccttgtccactgccggcgcagcg
gtcgcatggcgctgccagtacctaaatggggcccttcttggcgacccgcagccgtgcgcc
ggcaaccctggcactaccatccgagtagagaaactgttctacaacactctcgtgcggaga
cggtcgcttcgtgcttcggaggagtggggccgcatcgtggatatcgtgtcgcgctacgcc
ctggcctttcccgctgtcggatttacttgtcaccgtgagaaggcctacagaggtgcttct
ggcggcggagtctcttcgacggggtctctgagccgactgggaggcggcggtagcggtagc
aacgcaaccagtgccaccgccaacgctggtggctccggtgctggaggcctctgcttccca
cctcggtccagcacacggcagaacatacgactctctcacggtacccagcttgcctcgcac
ttgcgcctcgtgtacgcgtataacgtggggacagcgacgacactaccatgtggtccagag
cccgatacaggcttcgaaccgcttggatcggagctggaggaggggggcggcgcgctcagc
gcaggtgacgagtctgggctgctgtcagcgccaccatctgcgtcctcgttcaccaaagag
ttatcgccgtcgttatctgcggcgtccagacatagcgctgcccgagaggcgcgtgtgttt
gcgcagatggagctgcgcgcgcgacgcgtgcgggcgaccagtggcccagccggtgagggt
ctcttcactctcgttggctacacaagtgaccccacactgacccagcgcaagtcttatctg
tgcgtctttattaatcagcgtcttgtggagagcgccgcgatacgcaaggctatcgatgct
gtctacaacggtgtcctcactggtggaaaccgccccttcacagtgctcctcctctccgtc
cctacggaccgggtggacgtgaatgtgcacccgaccaagaaggaggtgtgtctcctggac
gaggagctgattgtgctgcgagtggcggaggtgtgccgcggggccgtgctcgaggcagca
gcggctcggcagatggatatgctaaagatgcgtcacaccgctgccctagcactgaaacag
gagttgccgagcgccgacggtgtcggtgccgcagacaatagcgcgacagcagagctgagt
gggagcagtagtcagcacatactggagaagctgcgggagcaacatcagcgtggcaccccg
ctagcctcacctctcacgtcatcatcccttacctccaaggcagctacggcaccagtggga
acaggagttggcggtggaccgagcgtcgtggcggcgccgtgcacagtggtccgtgttgag
ccacagagaggggcactggacaagtacttttcgcagcgactcgctgcaggtgctgcaccg
ccggcggcggcggcgaccgtgtcggcacctctttcgtctccgtcccactcgtcgttgctg
ccagccacgcaagcgacgccgtcgcaggtttcggtggactaccgccttcgcgcacaggcg
aaggcggcgctaaaaagtgaggataggcggcaggattcggtgagccatcttgcaaggagg
ggtgacgtagccaacgacgagcctcagacaacccctggttatgaggctccgctgtgggag
acggtgatggcctctctgcctgggcaacaggcacctgccaccaccgccgttgtcaccact
gacgcggatgacagtcatgggcccccttttgtgtctccttcgccggaagcagtccacagc
ggcgagagggacgacgacacggcagtacatacaattcgagcctaccgcgaggcggcagac
aaaggcgacgagggcgatccccgccttgctgtcccagctgtggtgcagatgacgaagaag
tacatagacagcaaagttgacggtggtacggactcagtgagggcacgcaccgagctactc
agtgaggaaagcgcagtcgacagtggcgacgaagacgaggatgacggcatgcgcgaattc
aagcgttatcggcacgaggtgcatgagcgggcgcagctgctgcaacgggccgccggcgtt
gctgccgctgcagcgtcgatgagcaagtctgcggtactgcacaaagagagctttgcggcg
gctcgatctccaagtactcacgtggggtcaccaccagcaacaaaggccgaaaaagcgcag
ctggccatggcgcacctcggtgcggtagtgcgagctgcagacatgcttcggagagaagct
gccgctgagaacgcctcgaactttgtgcacgcggttgcctctgacgaagagagcgacgtg
gacaaagagaaaatccagccaggcacctctccaagtggtgcttcacctggtgcgacggcg
tcgcttgtgaatgtcgctgaggtgcctgcgccagtgctgctgtcgagtgtgtccatcatc
gtggaccgcattctcgctgacgccagcccgacggcggacaacctcgttggtcagctctcc
ttcgtcggtgccgtggactcgcgtgcctttctggcgcaggcggggaccacgctgttatgg
tgcgacaccatggcgctggtgcgacacgctgtctttcagcgtatctttcttcgctggggt
cagcctgcgctgcctgcaccgccggtccttgtattcaccacaccgattcggctggcggat
ctactactgctcgcgctggcgtacgatgggccgcacctgcagccaccctcagtaacgctg
ttggcggttgtagatgaatgtatgaagaagcagcggtcagtctcgattggctctgacgcg
actcagcgagcagagactgctctaaccgcggatgcggtgcggcggatgggcggtgtgact
gcgctcgcgtggcgacagctgctgtttaaggcggatttggagcacagcaccctgagttac
gctgatctgcccactgaaagcggcgctgacggcgcctttgctgcttcggcatcggcgcta
ccacagcctgaaggtgccacgatgcgctacgtgcggcggctggtgcgccgtctgtgccgt
tggcgggctttgctgaaggagtacttctacattgacatcaccgccgacgggctgctcgtt
gggttgccctacgggctgaatcggcactggccgccgagaatgcgagctgttcctgtgatg
gtgtggctcttggcggaggcggtgccgtaccccggcgttgccgccctgtcgtcttctggc
atgagcgatgcagctgatcagatgagctcaacaggtgctccgtggcagagcggcaaaggc
cgaggtgcggagaaggccgtcacgtgtgttgctgcgtccacatcagtggcaacttccctg
gcgccgacgcaaacagaggtgactctcaccacgacgccgcagccgactgccatggaggca
gaggctgacggggttgcgcaggaggtagcgtgttttacagcagtggcgcgacacattgca
gcggcgctgtacggacttccgccgccgcctcctagcacactgtctccctctgcggaaggt
cctactgttgctactgctgacgtggccacaggagcgaccgacatggcgtctgtggagctt
tggagagaggaactcgtacagcacgggctcttcccgtgcttgaagaaccctcaacttttc
tgtctaccggaccactgcatgcgggatggcacgattcagtcgttggtctcagtggagtcc
ctctacaaggtgtttgagcgctgctga
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