Leishmania braziliensis: LBRM_25_1400
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Entry
LBRM_25_1400 CDS
T01113
Name
(RefSeq) conserved hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lbz
Leishmania braziliensis
Pathway
lbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBRM_25_1400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbz03019
]
LBRM_25_1400
Messenger RNA biogenesis [BR:
lbz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LBRM_25_1400
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LBRM_25_1400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
5416229
NCBI-ProteinID:
XP_001565644
UniProt:
A4HE86
A0A3P3Z8U9
LinkDB
All DBs
Position
25:complement(545928..547859)
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AA seq
643 aa
AA seq
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MSNIKKVQTEADRLLKKVNEGLDAYDELHEKLANAPNASAKERLEGDLKRELKKLQRHRE
AMKTFMQNDDYKEKTKMQVSRKKIEERMETFRAIEREMKTKAFSNEGLASAALERADSAT
EQWLKDAIEEGRKKIELLEYEVQKANNGRVRRGKQQQQKSEYQIRLENLQTHFFKWESLL
RMVNNEELDTDEVDDLQEPIQKVLEDDVELEVMEDMSIYDTFDIPEPKAKSVVPFDVSDY
EEKKVQSPKTTTKAKTPMSTVQAKPSPFITSLKEMVASPAAAKASSLTPVSPSILQPMSA
QASQQLSHVVSSLADNDNGEEEPVPEWMDDDMDTANDDTFGDEAMTGGGTIGSLAEMASV
TNKVVQDWEKPQKPIESPEPRTVKVSDAGHATLGERPKLTLPAAAPTPNAWERRAAEQQS
RQKAQQQQQQQQKNASNAALPVTPSWPSAAAAEASELEAVATPLVAPAATSPSTPASSTH
TDPIQSFPPIPGAAPGSKFTPKKIHELLDMSLGNLPHTLDVQRQRPYEPPNAIDAISYFP
QEVLPVLSSKDVYHHMDLDTLFFIFYYHQKSYQQYFAAKELKARSYRYHTKQQRWYQRLE
RPQTTTETEERGSYTFFDFEEKWDHDRIDDFLFEYKYLENELH
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacatcaagaaggtgcagacagaggcggaccgcctccttaagaaggtaaatgag
ggcctcgacgcgtacgacgagctgcacgagaagctagccaacgcgcccaacgcgagcgcc
aaggagcgcctcgagggagatctgaagcgggaactgaagaagctacagcggcaccgcgaa
gccatgaaaaccttcatgcagaacgacgactacaaggagaaaacgaagatgcaagtgtcg
cgcaagaagatcgaggagcgcatggagacgtttcgtgctatcgagcgtgaaatgaagaca
aaggccttcagcaacgaaggattagcctctgccgcgctggagagggccgactcggccacg
gagcagtggctgaaagacgcgattgaggagggccgcaagaagatagagctgctcgagtac
gaggtgcagaaggcgaacaacggccgtgtacgacgtgggaagcagcagcagcagaagtcc
gagtaccaaatacgcctcgagaacctgcagacccatttcttcaagtgggagtcactgctg
cgcatggtgaacaacgaggagctcgacaccgatgaggtggatgacctgcaggagccaatt
cagaaggtgctcgaggatgacgtggagttggaggtaatggaggacatgtccatctacgac
accttcgacataccggagccaaaggcaaagtccgtagttcccttcgacgttagcgattac
gaggagaagaaggtacaatcaccgaagacgacgaccaaagctaagacgccaatgtccacg
gtgcaggccaagcccagcccgttcatcacctccctgaaggaaatggtggcgtcgccggcc
gcggccaaggcttcgtcccttaccccggtctccccgtcgatactgcaaccgatgtccgcg
caagcctcgcagcagctgtcccacgttgtaagcagtctagcagacaacgacaacggcgag
gaggagccagtgcctgagtggatggacgacgacatggacaccgccaacgacgacaccttt
ggcgatgaagccatgactggcgggggcacgatcggctctctcgctgaaatggcctcagtg
acgaacaaagtggtgcaggactgggaaaagccgcagaagcccatagagtcgccggaaccg
aggacggtgaaggtatccgacgccggccacgcaacactgggggagaggccaaagctgact
ctgcccgccgcggcgccgacaccgaacgcgtgggaacgacgtgctgccgagcagcaaagc
cgacaaaaggcacagcagcagcagcagcagcagcagaagaacgcctccaatgctgcctta
ccggtgacgccatcctggccatccgctgcggctgccgaagcgagtgagctggaggcagtg
gcgactccgctggttgccccagcggcaacttctccgtcgaccccggccagcagcactcac
acagaccccatccagtccttcccgccgattcctggtgccgctcccggctccaagttcaca
cccaagaagatccacgaactcttggatatgtcgcttggcaacctgccgcacacgctcgac
gtgcagcgacagcgcccttatgagccgccgaacgcaattgacgcgatctcgtactttccc
caggaggtgttgccggtgctgtcaagcaaggacgtctatcatcacatggacctcgacacg
cttttcttcatcttttactatcaccagaagtcgtatcagcagtactttgctgccaaggag
ctcaaggctcgctcctatcgctaccacacgaagcagcagcggtggtaccagcggctagag
aggccgcagacgacgacagagacggaggaacgcggctcatacaccttcttcgactttgag
gagaagtgggaccacgaccgcatcgacgacttcctcttcgagtacaaatacctcgagaat
gagcttcactga
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