Leishmania braziliensis: LBRM_27_1140
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Entry
LBRM_27_1140 CDS
T01113
Name
(RefSeq) putative vesicular transport protein (CDC48 homologue)
KO
K14571
ribosome biogenesis ATPase
Organism
lbz
Leishmania braziliensis
Pathway
lbz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LBRM_27_1140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbz03009
]
LBRM_27_1140
Ribosome biogenesis [BR:
lbz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
LBRM_27_1140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_33
AAA_22
AAA_14
RNA_helicase
AAA_2
AAA_28
TIP49
IstB_IS21
nSTAND3
ABC_tran
Mg_chelatase
NPHP3_N
TsaE
AAA_3
NACHT
AAA_17
AAA_11
Zeta_toxin
AAA_18
AAA_24
AAA_7
ATPase_2
Vps4_C
NB-ARC
Sigma54_activat
Parvo_NS1
NTPase_1
Rad17
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
5416734
NCBI-ProteinID:
XP_001565873
UniProt:
A4HFM9
A0A3P3Z9V1
LinkDB
All DBs
Position
27:complement(439107..441107)
Genome browser
AA seq
666 aa
AA seq
DB search
MSDMSDRLKGKLKHMARQTPNGYRKQRPGSGPRHFADDNYPNHGKRPRDEEEGRQQDSKS
SSSRAPSGKGVGKNASDGGEGEVLGVIPKTTLEDMGGLAKELPVIKELIQLPIRMPHLFN
YLGADPPCGVLLHGPPGVGKTRLVHAIAGSLQVPLFFVSAPEIVSGISGDSEAKLRNLFM
DAIAASPSIVFIDEIDTIAGRREDAQRGMESRIVGQLLTCMDQVSQAWRQHRKVVCVMGA
TNRPEALDTALRRAGRFDREIALGIPSIDERQSILNIICSKINLSDDVDFFELANMTPGY
VGADLQLLVKEACVLAIRRKYKELDERGAVEGVKTEELSGFCVTFGELKEATKRVQPSAM
REGFTTIPNVSWDDVGALEDVREELVTSILQPIRAPKLHHRFGLDHPVGVLLYGPPGCGK
TLVAKAIANQSGANFISIKGPELLNKFVGESERSVRMVFARGRASAPCVLFFDELDALAP
RRGSDRANPSSERVVNQLLTELDGVEGRKDVYVIGATNRPDMIDPAMLRPGRLDKLLYVP
LPSAAQRGSILQTHARKYPVDAEVNLERLALDERLAGFSGADLAALMREASLTALKGVYR
SHTKDELEGLERDITGKSADTAALPTITADNFEASLAKIKPSVSAADRANYESMSLELRN
SAKSVG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacatgagtgaccgcctcaaggggaagctgaagcacatggctcggcagactccc
aacggatatcgcaagcagcgacccggtagcggcccacggcactttgctgatgacaactac
ccgaaccacgggaagcgtccgcgtgatgaagaggagggaaggcagcaggacagcaagtcc
agcagcagccgggctcccagtggcaagggggtaggaaagaatgccagcgacggtggagag
ggcgaggtgctcggtgtcattccaaaaactaccctcgaagatatgggtggcttggccaag
gagctgccggtaattaaggagctcattcagctgcctatccgcatgccgcatctcttcaac
taccttggtgcagacccgccatgcggcgtcttgttgcacggtcccccaggcgttggcaag
acgaggctcgtccacgctatcgctggctcgctgcaggtgcccctcttcttcgtctcggcg
ccagagattgtctccggcatcagcggcgacagcgaggcaaaactgaggaacttgttcatg
gacgccatagcagcgtcgccgagcattgttttcatcgacgagatcgataccattgcaggc
cgtcgcgaagatgcccagcgcggtatggagagccgcatcgttggacagctgcttacgtgc
atggatcaggtgtcgcaggcgtggcggcagcacaggaaggtggtgtgcgtgatgggggcg
actaaccgccctgaagcgctcgacacggcgctgcgccgcgctggccggtttgatcgcgaa
atcgccctcggcatcccttcgatcgacgagcggcagagcatcctcaatatcatctgctca
aagattaatttgtcggacgacgtcgatttcttcgagctcgccaacatgacccccggctac
gtcggcgcagacttgcagcttctcgtcaaggaggcgtgcgtcctcgctatccgccgcaag
tacaaggagctggacgagcgcggtgctgtggagggtgtaaagacggaggagctctccggg
ttctgcgttacgtttggtgagctgaaggaggcaacgaagcgggtgcagccgtcggcgatg
cgggagggcttcacgaccatcccgaacgtttcctgggacgacgttggcgccctcgaagac
gtgcgagaggagctggtgaccagtatattgcagcctatccgggcgccgaagctgcaccac
cgctttggtctcgatcaccctgtcggtgtgctgctctacggtccaccaggctgcggcaag
acactggttgcaaaggcaatcgcgaaccaatctggagcaaacttcatctcgatcaagggg
ccagagctgctcaacaagttcgttggggagagtgagcgcagcgtacgcatggtcttcgcg
cgtgggcgggcaagcgctccatgtgttctctttttcgatgagttggatgccctggcaccg
cgccgtgggtcggacagggcaaacccaagcagcgagcgcgtggtaaaccaacttctgaca
gagctggacggcgtggaagggcgaaaggatgtctacgtgattggagccacgaaccgcccc
gatatgattgaccctgccatgctgcgtccaggtcgcctggacaagctgttatacgtgccg
ttgccgtcggctgcgcagcgcggatcgattctgcagacccacgcccgcaagtatccagtg
gatgctgaggtgaacctggaaaggctggcgcttgacgagcggctcgccggcttcagcggt
gccgacttggcagccctaatgcgcgaggcatcgctgaccgcgctaaaaggcgtgtacagg
tcgcacacgaaagacgagctggaagggctggagcgcgacatcaccggcaagagcgccgac
acggcggctttgcctaccatcacggcagacaacttcgaggctagcttggcaaagatcaaa
ccatcggtctctgcggcggatcgggcaaattatgagagcatgagtcttgagttacgcaac
agcgccaagagtgtcgggtaa
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