Leishmania braziliensis: LBRM_27_2480
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Entry
LBRM_27_2480 CDS
T01113
Name
(RefSeq) transcription elongation regulator-like protein
KO
K15172
transcription elongation factor SPT5
Organism
lbz
Leishmania braziliensis
Pathway
lbz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
LBRM_27_2480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbz03021
]
LBRM_27_2480
03019 Messenger RNA biogenesis [BR:
lbz03019
]
LBRM_27_2480
Transcription machinery [BR:
lbz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
LBRM_27_2480
RNA polymerase I system
LBRM_27_2480
Messenger RNA biogenesis [BR:
lbz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
LBRM_27_2480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW4_SPT5
KOWx_SPT5
KOW
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
5416868
NCBI-ProteinID:
XP_001566001
UniProt:
A4HG07
A0A3P3ZA85
LinkDB
All DBs
Position
27:complement(989441..991522)
Genome browser
AA seq
693 aa
AA seq
DB search
MAEEVNYDELADLLGSNGGFMSEAADGVVGKHERDRLRKHKKHRRDKKRSREEDNAGSSD
DKRVRSKYVLDAAESGDSNDEDELSDADLVDDDEEVEDVNYDDRPKRYMFHEGDDKKSVD
EMARYYEEVDRHYHRHGDNEDALLTRSDLSSRRLASQFLPREDDPKVFAVKCRPRMSRML
VTRIVNKCYAYRVGRNYEHKKVDLGIISVFALDHVKEYIYVEASRKRFVENVLNGLDGVF
RFNIAVVDPKELLQTMETRPSTQKVRVGDYVRLRQRFYRGDLAQVTALHPDGVHITCKVV
PREDFVQKPFNKATKRLEPRFFTPRQAVDVREMENSYVWGDLHFDREGYLLKTVSTRMVV
SGAQLEQPSIEELARFYNDQREKVERALRAAEAAAQVPPISIGDSVRVTTGQLRNTIGVV
ENVFTNTNTAVLTCTVPGRVQPIKVQVELSACTKHFSEGAHVVVERGEHAGESGTVVKSW
GSIVLLFPDRAAVGAELKVEANDCHQSKLGSVSVHSKGVWQVFDLVSITEPNCVGCIVRL
NRSDVDVLTENNDVRTLSYAQVNAVGRDTRQTTDCRENTLSRGAEVHIQKHPWTPIGLEG
QTGRIEHIFHRTIFVRCRASPLHANIVALKAECVLLIGGRKTTRRTAPAQEVATGMSADQ
YAAAAVRLSAGQSRDSELWDESSMMDVNASAMA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaggtgaactatgacgaactggcggacttgctagggtcgaatgggggtttt
atgagtgaggccgccgacggcgtggtgggcaaacatgagagggataggctgaggaagcac
aaaaagcacaggagagacaaaaagcggtcacgtgaggaggataatgccgggtcttccgat
gataagcgcgttaggtccaagtacgtcctggatgccgcagagagcggcgactccaatgac
gaggacgagttgtctgatgcagacctcgtcgatgatgacgaggaggttgaggacgtcaac
tacgatgatcgtccgaagcgctacatgttccacgaaggcgacgacaagaaaagcgtggat
gaaatggctcgctactacgaggaggttgatcgacactaccaccggcacggagacaatgaa
gatgcactgctgacacgcagcgacctgtcctcacgtcgcctcgcctcacagtttctgcca
cgcgaggacgacccgaaggtattcgctgtcaagtgccgccctcggatgtcacgcatgcta
gtgacgcgtattgtgaacaaatgctacgcctaccgtgttgggcgcaactacgagcacaag
aaggtcgacctcggcatcatctccgtcttcgcgctggatcacgtgaaagagtacatctat
gtcgaggcgagtcgcaagcgcttcgtggagaacgtgctcaacggtctcgatggcgtcttc
cgcttcaacatcgccgtggtggaccccaaggagcttctacagacaatggagacgcgtccg
tccacgcagaaggtgcgtgttggcgactacgtgcgcctgcgccagcgcttttatcgtggt
gaccttgctcaggtgacggcgctgcacccggacggggttcatatcacgtgcaaggtggtt
ccccgcgaggactttgtacagaagccattcaataaggcgacgaagcgacttgagcctcgc
ttcttcacaccgcggcaggcggtggatgttcgagagatggagaactcatacgtgtggggt
gatctgcattttgaccgggagggctatctcctcaagactgtttcgactcgcatggtggtg
tcgggagcgcagctagagcagcccagtatcgaggagctcgccaggttctacaacgatcag
cgcgaaaaggtggagcgggccctcagggcagcggaggcggctgcgcaggttccacccatt
agcattggtgactccgttcgtgtgacgacaggacagctgcgcaacactattggagtggtg
gaaaacgtgttcaccaatacgaacacggccgtactcacttgcacagtgcctggccgcgtg
cagcccatcaaggtgcaggtagagcttagcgcgtgcacaaagcacttctctgaaggcgcg
cacgtcgtagtggagcgtggtgagcacgctggtgagtccggtaccgtggtcaagtcctgg
ggcagcatcgtgttgttgttcccggaccgcgccgccgttggggcggaactcaaggtcgag
gcgaacgactgccaccagagcaagctgggaagcgtatctgttcactcgaagggagtgtgg
caggtgtttgatctcgtctccattacggagccaaactgtgttggctgcatcgtgcgcctg
aaccgcagcgatgtggatgtgctgacggagaacaacgacgtgcgcacgttgtcgtacgcg
caggtgaacgcggtggggcgtgacacacgccagacgacggactgccgcgaaaacacgctt
tctcgaggcgcggaggtgcacatccagaagcacccctggacaccgattggcctggagggg
caaacgggccgcatcgagcacatctttcaccggaccatctttgtgcgctgtcgcgcatcg
ccccttcatgcgaacatagtggcattgaaggcagagtgcgtgctcctcatcggcggccgc
aagacgactcgccgcactgcaccggcgcaggaggtggcgacgggaatgagcgcagaccaa
tacgccgcggctgccgttcgcctctctgctgggcagagccgcgactcggagctatgggat
gagagctcgatgatggacgtcaatgcatccgcgatggcctag
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