Leishmania braziliensis: LBRM_28_0480
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Entry
LBRM_28_0480 CDS
T01113
Name
(RefSeq) conserved hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
lbz
Leishmania braziliensis
Pathway
lbz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LBRM_28_0480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbz03009
]
LBRM_28_0480
Ribosome biogenesis [BR:
lbz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LBRM_28_0480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_Prp19
WDR55
Beta-prop_WDR75_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
5416954
NCBI-ProteinID:
XP_001566080
UniProt:
A4HG86
A0A3P3ZAM6
LinkDB
All DBs
Position
28:complement(153593..155980)
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AA seq
795 aa
AA seq
DB search
MQSCFAACSQVVCVGEDTAVAFYAPKSLRKFRVERLNGSRVCGVYVKVISSTKAALYVID
AEATLFEFVIEGGAPSLVRTCSIRLPPALVVTPTSAQKHENALEVQPLESVSGTANVEAA
ATDSVVMVAQFHVQQAQLFAVLLTKAGVYEAALASATAAGATSVPSAVVVHVFKEPLSFG
YLSVGQFTGLVVVAVPHAREFFYSLFTDRLSTHQPHRPSCPSLRPRAVNVQIQSIACSPT
GTSVAVGGRRGELLIYVEVQEAHCFADHWHHTPLTALAFALDGSAVYTGGREAVLLIWNL
VSYSHKKVKVQLGTLQRITPFSSAGSQLLLSCGTSTLAVADLLQMRVTTSAEGIEWTAEG
VCTGLLVEQWGGSPAVILTGMPDVLRVCDPYTQQSIYSLHVSSQMETIPSPPRHGIQFVG
LLNDSRSLVTYESFSSTVLPPLLRFWEYDASRKQHVETQTLYSPHRSAVLALAVEKRGQR
VFTLSCEAMKCWAQTAFTTQDTYGTLSGGWHNHSTMATPSQQVQAMTLSADGSLCFVADD
CLHVYSVQDCKPGERWPLLRLLPQYTETQPLRQIVVSPDCRHVVAAGKQQIFFWTLDRCA
DEPTVFSVGDSCITALSAFTDTTMVAALQDTSLVELCCCTTGSGKGPQLGEVVRRVRNAS
RFPLRHIVPLHTNGQRLAAVDAATGFKILQLPTEVTTAAQSSVYEWVNSSDDASGVGNGP
EGDKTARLQLQSFFKEMNSFQDSQEAMMTVNQERALATAQQTTQADRWLAEVLGEPAYTV
PLMSTILSTYLQRQS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctgcttcgctgcctgttcgcaggtggtctgtgtgggagaggacactgcggtg
gcgttttatgcgcccaagtcgctgcggaagttccgtgtggagcggctcaatgggtcccgc
gtatgcggcgtctatgttaaggtcatctctagcaccaaggcggcgctgtacgttatcgac
gcggaggctacgctgttcgagtttgtgattgagggtggtgcgccatccttggtgcgcaca
tgctccattcgactcccaccggccttagtcgtcacccccacttcagctcaaaagcatgag
aacgccttagaggtgcagccactggagtcagtgagcgggacggcgaacgtggaggcggct
gcaaccgattccgttgtcatggtcgcccaattccatgtgcagcaggcacagctattcgcc
gttctgcttacgaaagccggtgtctacgaagctgcgctggcttccgccacagcggcgggg
gcgacaagcgtgccatcggcggtagtggtgcatgtcttcaaggagcccttgtcgtttggg
tatctgtccgttgggcagttcactggtctggtcgttgtagccgtcccacacgcgcgtgag
tttttctactcgctcttcacggatcgcctctccacccaccagccgcaccgcccttcctgt
ccgtctctccggccgcgcgcggttaatgtgcagatccagagcattgcctgcagcccaacg
ggcacgtccgtcgccgttggcgggaggcggggtgagttgttgatctatgtggaggtacaa
gaggcacactgcttcgccgaccactggcatcacacgccgctgacagcgcttgcctttgct
ttagacggcagcgcagtgtacacaggcggccgcgaggcggtgctgctaatctggaattta
gtgtcctacagtcacaagaaggtgaaggtgcagctgggcacgctgcagagaatcacgccg
ttcagcagtgcagggtcgcagctgctgttgtcgtgcggcacatcaaccctcgccgttgcg
gacttgctgcagatgcgcgtgacgacgtctgcagagggcatcgagtggaccgctgagggt
gtgtgcaccggactcctcgtcgaacagtggggagggagtccggcggtgattctgacgggg
atgccagatgtgctgcgtgtgtgcgacccgtacacacagcagtctatctactccctgcac
gtctcttcgcagatggagacaatcccgagtccgccccgccacggaattcagttcgttggc
ttgctgaatgatagccgctcactcgtgacgtacgagtccttctcctcgacagtgcttccc
ccgctgctgcgcttctgggagtatgacgcctcacgtaagcaacatgtggagacgcaaacc
ctgtactctccacatcgctctgccgtgctggctctggcggtagagaagcgaggccaacga
gtgttcacgctgagctgcgaggcaatgaagtgctgggcacagactgccttcacaacgcag
gacacgtacggcaccctgtcgggcggctggcacaaccactcaacaatggcgactccctcc
caacaggtgcaagccatgaccctgtctgcggacggctcgctctgcttcgttgcggatgac
tgcctgcacgtatactcggtgcaggactgcaagcctggagagcgctggccactgctgcga
cttttgccgcagtacacggagacgcagccgctgcgccagattgttgtgtctcctgactgc
cggcacgttgtggcagctgggaagcagcagatctttttttggacactggacaggtgtgca
gatgagccgacagtgtttagcgtgggcgattcgtgcatcacggccttgagcgccttcacg
gacacaacgatggtagctgccctccaggacacatcccttgtggagctctgctgctgcacc
accggcagtggcaagggaccgcagctgggtgaggtggtacgtcgtgtccggaacgcctct
cgcttcccgttgcgccacattgtgccactacacacgaacggccagcgtctcgctgctgtg
gatgccgcaacaggcttcaagattttgcagctaccgactgaggttacgactgcggcacag
tcctccgtgtatgagtgggtcaactccagcgacgacgcgagcggcgtgggtaacgggcca
gaaggcgacaagacggctcgacttcagctgcagtcctttttcaaggagatgaactccttc
caggactcgcaggaggcgatgatgacagtaaatcaagaaagggccttggcaacggcgcag
cagacgactcaggcagatcggtggctcgctgaggttcttggtgagccggcctacacagtg
ccactgatgagcactattctctccacgtacctgcaacgtcagtcgtag
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