Leishmania braziliensis: LBRM_28_0550
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Entry
LBRM_28_0550 CDS
T01113
Name
(RefSeq) RAD50 DNA repair-like protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03440
Homologous recombination
lbz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBRM_28_0550
03450 Non-homologous end-joining
LBRM_28_0550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbz03032
]
LBRM_28_0550
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_28_0550
DNA replication proteins [BR:
lbz03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
LBRM_28_0550
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
LBRM_28_0550
BRCA1-C complex
LBRM_28_0550
NHEJ (non-homologous end-joining)
MRX complex
LBRM_28_0550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
AAA_21
AAA_29
ABC_tran
Rad50_zn_hook
RsgA_GTPase
zf-C2H2_6
AAA_22
Motif
Other DBs
NCBI-GeneID:
5416961
NCBI-ProteinID:
XP_001566087
UniProt:
A4HG93
A0A3P3ZAU3
LinkDB
All DBs
Position
28:complement(185215..189300)
Genome browser
AA seq
1361 aa
AA seq
DB search
MTSIEKLQLCGVRSFDPNPANQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGAMPPG
SGAEKGSFVYDPKVVGETEVKAQIRLIFTGKGSKVMQVIRSFQATRSAHRVTFTTLDNTV
AFQDSATGEVISSTYRSSDVDRVVPEMLGVSPAVLTHVIFCHQEECNWPLGPPKDVKRIF
DDIFAATRYVLALDRLRDNSKEFRRQLKEHEASLMALREHREQAKQLEQQIAQKESLVKA
IQSRSIGIEPELRGLCQAREELRAVEEQIETLQREVAVTSGRLEERREAIRRMGAPTTSQ
TLEDLLEIRRCFGAQMQQLEESLVRDTKRHDAAAARRRIQEEEMYKCRSNVQLLEREALV
HKGNVVQLRELIQHLSSEYVLSEDSIDELSLQRVLQKAEVAVAAARQRICAATECVQQRI
QDAEDGVQGNSRAVDGCNREIEMREHALEGVCRRIKENAAAISALGGDGCRTQLLQVQTE
VEELQQRVAAAEVLRKKGGEAKRSQHILVELEEQNSAVAQLREEMMQQKLMERQGQDLVL
LRQQVDESNAAVATALQRDVLPILQEIGMQVPQDVGADTFSLQTLTSLRTQTAQVQQLKA
EDLRALQTRVLELENMCAIEEQQMSYNTNELDQCRRSVDAGTRQCSGLVSNMEDYEEMLL
QAREAAETASQRRHALETLATCYHDFMVVAREKGMCAVCERSFESEDALERFLTRNAAKQ
RTSPDQLAAVEAAVTKAQATYEGFEKLQNVVATVRRNLPRIPDLEAELEALEERVKKNRA
EQRKVSAARDASQHVVHQLDIVFQHLCRVCTMGEKTVALRDTLRRKEKDAEAAQAEQQRQ
PQIRRMQGSGDGAAERVQLPQRSFEELSEAYAASTERLHQLNRQFAEAQRMECGQDENAV
HRQLQERKAALFQAEVAVAKLEDLETVARELQEEAVQHRTRLEELKVQATEAQRSVEVHQ
RRVLQLRTELQKAEAAERGALDTAEQQLRQLQLSLPAVLSYVQNGCNQRLEGLRGHLRET
ESAYEAATQEEEELASRINEARTTLSDQHRRSADMDRQIDVLQQAVSIAADEARLTETER
TLASLKSDRLHDVEQLLGEEAGQASLAALREMITAKITSLEKIRAQQDGNTEAMLLDVSQ
LKQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKITQINQII
AELWRQTYRGSDIDTVEIRSETEGTTTTAARRSYNYRVVMKRGNNEMDMRGRCSAGQKVL
ASIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIEVRRAVKHFQLVVIT
HDEQFVRALGGQSLEKFYYVHKDREGAFSVIDERTFDQLFA
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcatcgagaagttgcagctgtgcggtgttcgcagcttcgacccaaacccagca
aatcagcagttcattcagtttcagaagcctttgacggtcattctcggtaagaatggtgct
ggcaaaaccaccatcatcgaggccctgctgaacgcgtgtacgggggccatgccgcctggc
agtggggctgagaagggttcttttgtctatgatcccaaggtcgttggcgagacagaggtc
aaggcgcagattcgactgattttcacaggaaagggtagtaaggtgatgcaggtcatccgc
tccttccaggctacacggagcgctcaccgcgtcacttttactacactcgacaacaccgtc
gctttccaggactcggctaccggggaggtgatctccagcacgtaccgttccagtgatgtg
gaccgtgtcgtaccagagatgttgggtgtctcgcccgctgttctgacacacgtcattttc
tgccaccaggaagagtgcaactggccactggggccgccgaaggatgtgaagcgtatcttt
gacgacatcttcgccgccacccggtacgtcctcgcactggacaggttgcgcgacaacagc
aaagagttccgccgccagctgaaggagcacgaggcaagtctgatggccctacgggagcac
cgcgagcaagcgaagcagctggagcagcagattgcgcagaaggaaagccttgtcaaggcc
attcagagccgcagcatcggcatcgagccagagctgcggggcctgtgccaggcacgggag
gaactgcgtgcagtggaggagcagatcgagacgctgcaacgtgaggtggcggtcaccagc
ggacgtctcgaagagcgccgcgaggccatacgacgcatgggtgcacctaccacaagtcag
acactagaggatttgctcgaaatacgccgctgctttggagcgcagatgcagcaactcgaa
gagagcctcgtgcgcgataccaagcgccacgatgcagccgcagcgcggcggcgcattcaa
gaggaggagatgtacaagtgccgctcgaacgtgcagctgctggagcgtgaggcgctggtg
cacaaggggaatgtggtgcagcttcgcgaacttatccagcacttgtccagcgagtacgtc
ctgagcgaagacagcattgatgagctcagcctgcagcgggtgctccaaaaggcggaggtg
gccgtagcagcggcacgtcagcgcatttgcgctgccacagagtgcgttcagcagcgtatt
caagacgcagaggacggcgtgcagggcaactctcgcgcggtggatggatgcaacagggag
atcgagatgcgcgagcacgccctggagggtgtgtgccgccgcatcaaggagaacgccgct
gccatctcggcccttggcggcgacgggtgccgcacacagctgctccaggttcagaccgag
gtggaagagctgcagcagcgtgtcgccgccgctgaagtgttgcggaagaagggcggtgag
gcgaagcgcagtcagcacattctcgtggagttagaggagcagaacagtgcggtggcccaa
ctgcgcgaggagatgatgcagcagaagttgatggagcgtcaggggcaggatctagtgttg
ctgcgtcagcaggtcgacgaatccaatgcggctgtggcgacggcgttacagcgagatgta
ctcccgattttgcaagagatcggcatgcaagtcccacaggatgtgggtgctgacaccttc
tcattgcaaactctaacgtctttgcgcacccaaaccgcccaggtacagcagctcaaggcg
gaggacttgcgcgcgctgcagacacgcgtactagagctagagaatatgtgtgccatagag
gagcagcagatgtcctacaacaccaatgagctagaccagtgtcgccgctctgttgatgcc
ggcactagacaatgctccggtctcgtctctaacatggaggactacgaggaaatgctacta
caggccagggaggcagcagagacggcgtcgcagaggcgccacgccctggagacccttgcg
acgtgctaccacgattttatggtggtggcgagggagaaggggatgtgcgccgtctgcgag
cgttcctttgagagtgaggacgcgttggagcgttttctgacgcgaaatgcagccaaacag
cgcaccagccccgatcaactggcggctgtggaggcggccgtcaccaaagcccaggcgacc
tacgaaggttttgaaaagctgcagaacgtcgtggcgactgtgcggcggaacttgccgcgt
attccagatctggaggccgaacttgaagcgcttgaggagagggtgaagaagaatcgagcg
gagcagcgcaaggtctctgcggcccgcgatgcctctcagcatgtggtgcatcagctggac
atcgtgttccagcatctgtgcagagtgtgcaccatgggggagaaaacggtggcactgcgc
gacacactgaggcggaaggagaaggatgctgaggcggcgcaggcggagcaacagcgacag
ccacagatacgacgaatgcagggcagcggcgacggtgccgcggaaagagttcagctgccg
cagcgctcctttgaggagctttctgaggcctacgcggcttcgacggagcggctgcaccag
ctcaataggcagtttgctgaggcccaacggatggagtgcggccaggacgagaatgcggtg
catcggcagctgcaggagcgcaaggcagcgctgttccaggcggaggttgcggtggcaaag
ctggaggatctagagacggtagctcgtgagctgcaggaggaggcggttcagcaccgcacg
cgactggaggagctgaaggttcaggcaacagaagcgcagcgtagcgtggaggtgcaccag
cggcgcgttctgcaactgcgtaccgagcttcaaaaggcggaagctgccgagcgcggcgct
ttggacacagcggaacagcagctccgccagttgcagctctcactgcctgcggtgctcagc
tacgtacagaacggctgcaaccaacgattggaggggcttcgggggcacctacgcgagacc
gagagcgcgtacgaggccgcgacccaggaggaagaggagctagccagtcggattaacgaa
gctcggacgacgctaagtgaccagcaccgccgctccgctgacatggaccgccagatcgat
gttctgcagcaggcggtgtccatcgcggccgacgaggcgcgcctgacagagacggagcgc
actctcgcctcgctgaagtcggaccgcctgcacgacgtggagcagctattgggcgaggag
gcgggacaggcgagcctcgcagcactgcgtgagatgatcaccgccaaaatcacgtcgcta
gagaagatacgcgcgcagcaagacggcaatacggaggcgatgctgcttgatgtgagtcag
ctgaagcagcagctgcgtggcgacaagtaccagaacatcgaaaagcgttaccggtcgact
tttctgaaagtgcaaacgacggagatatctatccaggatatcgagaagtactacagcgct
ctggagaaggcggtgcagtcgtaccaccaggagaagattacgcagattaaccagatcatc
gcggagctatggcgccagacgtaccgcggcagcgacattgacacagtggagatccggtca
gagaccgaggggacgacaacgactgcggcgcggcgcagctacaactaccgcgttgtcatg
aaacgtggaaacaatgagatggacatgcgtggtcgctgcagcgctgggcagaaggttctt
gcctcgatcatcattcggctcgcgctgagcgaagccttctgctgcgactgcggtatcctc
gcccttgatgaaccgacaacaaacctcgacgacgacaacgctcgcagcctggcggacgcg
ctgcggaccctcattgaggtgcggagggcggtgaagcactttcaactcgttgttatcacg
cacgacgagcagtttgtgcgtgcgttgggtggccagtcgctggagaagttctactacgtt
cacaaggatcgcgagggtgccttctcggtgattgacgagcgcacatttgaccagctcttt
gcgtga
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integrated database retrieval system
