Leishmania braziliensis: LBRM_28_1700
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Entry
LBRM_28_1700 CDS
T01113
Name
(RefSeq) putative DEAD box RNA helicase
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03013
Nucleocytoplasmic transport
lbz03015
mRNA surveillance pathway
lbz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LBRM_28_1700
09122 Translation
03013 Nucleocytoplasmic transport
LBRM_28_1700
03015 mRNA surveillance pathway
LBRM_28_1700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbz03019
]
LBRM_28_1700
03041 Spliceosome [BR:
lbz03041
]
LBRM_28_1700
03009 Ribosome biogenesis [BR:
lbz03009
]
LBRM_28_1700
03012 Translation factors [BR:
lbz03012
]
LBRM_28_1700
Enzymes [BR:
lbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBRM_28_1700
Messenger RNA biogenesis [BR:
lbz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LBRM_28_1700
mRNA cycle factors
Stress granule specific factors
LBRM_28_1700
Spliceosome [BR:
lbz03041
]
Complex C
Other components
EJC/TREX
LBRM_28_1700
Ribosome biogenesis [BR:
lbz03009
]
Eukaryotic type
90S particles
Helicases
LBRM_28_1700
Translation factors [BR:
lbz03012
]
Eukaryotic type
Initiation factors
eIF-4
LBRM_28_1700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
TelK_muzzle
Motif
Other DBs
NCBI-GeneID:
5417076
NCBI-ProteinID:
XP_001566200
UniProt:
A4HGK6
A0A3P3ZAW2
LinkDB
All DBs
Position
28:590142..591311
Genome browser
AA seq
389 aa
AA seq
DB search
MEAEQVDNIQANVLAIPTFEAMGLKEDLLKGMYRFGYKQPTAIQKRFIMPFLKGRDVIAQ
ASSGTGKTSAFCVCLLQACDPHTREPQALILSPTRELAVQTQDLCNNIGHHMGLKAYACI
GGKSTEEDIRRLENGVHIVSGTPGRVFDMIRRKSLRVNGLKTLVLDEADEMLGKGFKAQI
HDIYRMIPPLQIILVSATLPADVLEMTEKFMTEPASILVKRDEITVDSVRQYFVSVDEEK
NKFDVLMELYDSLTIAHAVVFCNTRKKVEQLAKKMTREKFTVVAMHGDMPQAERDEIMRQ
FRDGHSRVLITTDLWARGIDVERVSLVLNYDLPLAREQYIHRIGRTGRMGRTGLAITFVR
HDELRLLRDIEQFYATQIEELPANIGEQM
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcaagtagataatattcaggccaacgtgctcgccatccccaccttcgag
gcgatggggttgaaggaggacctgctgaagggcatgtaccgcttcggctacaagcagccc
accgccattcagaagcgcttcattatgcctttcttgaagggacgcgacgtcatcgcacaa
gcgtcctctggcacaggcaaaacgtctgccttctgtgtctgccttctgcaggcgtgcgac
ccgcacacgcgtgagccgcaggccctcatcctctcgccgactcgcgagctggctgtgcag
acgcaggatctgtgcaacaacattggccaccacatggggctgaaggcgtacgcgtgtatt
ggtggcaaaagcacggaggaggacatccgccgcctggagaatggtgtgcacatagtctcc
ggtactcctggtcgtgtcttcgatatgatccgccgcaagagccttcgtgtgaacgggctg
aagacccttgtgctagacgaggcggatgagatgctgggtaagggattcaaggctcagatt
cacgacatttaccgtatgataccgccgctgcagatcatcctcgtgtcggcgacactgccg
gctgacgtgctggagatgacggagaaattcatgacagagcccgcgagcattctcgtcaag
cgcgatgagatcactgtggatagtgttcggcagtactttgtctctgtcgacgaggaaaaa
aacaagtttgatgtcttgatggagttgtacgacagtctcacaatcgcccacgcggtagtg
ttttgcaacacccgtaaaaaggtggagcaactcgcgaagaagatgacgcgcgagaagttc
actgtggtcgccatgcatggcgacatgccccaggccgagcgtgacgagattatgcggcag
ttccgcgatggtcacagtcgcgtgctcatcacaactgatctctgggcgcgtggcattgat
gtggagcgcgtctcgcttgtcctcaactacgatttgccgctcgcgcgtgagcagtacatt
catcgcattggccgcactggtcgcatgggccgcactgggcttgccatcacattcgtgcgc
catgacgagctgcgcttgttgcgcgatatcgagcagttctacgcgacgcagattgaggaa
ctccccgccaacatcggagaacaaatgtag
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