Leishmania braziliensis: LBRM_28_1990
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Entry
LBRM_28_1990 CDS
T01113
Symbol
RPA1
Name
(RefSeq) putative replication factor A, 51kDa subunit
KO
K07466
replication factor A1
Organism
lbz
Leishmania braziliensis
Pathway
lbz03030
DNA replication
lbz03420
Nucleotide excision repair
lbz03430
Mismatch repair
lbz03440
Homologous recombination
lbz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBRM_28_1990 (RPA1)
03420 Nucleotide excision repair
LBRM_28_1990 (RPA1)
03430 Mismatch repair
LBRM_28_1990 (RPA1)
03440 Homologous recombination
LBRM_28_1990 (RPA1)
03460 Fanconi anemia pathway
LBRM_28_1990 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbz03000
]
LBRM_28_1990 (RPA1)
03032 DNA replication proteins [BR:
lbz03032
]
LBRM_28_1990 (RPA1)
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_28_1990 (RPA1)
Transcription factors [BR:
lbz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
LBRM_28_1990 (RPA1)
DNA replication proteins [BR:
lbz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
LBRM_28_1990 (RPA1)
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
LBRM_28_1990 (RPA1)
MMR (mismatch excision repair)
LBRM_28_1990 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
LBRM_28_1990 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Zn_ribbon_TiaS
Zn_ribbon_15
Zn_ribbon_6
tRNA_anti_2
DZR
Motif
Other DBs
NCBI-GeneID:
5417105
NCBI-ProteinID:
XP_001566229
UniProt:
A4HGN5
A0A3P3ZB17
LinkDB
All DBs
Position
28:complement(720911..722314)
Genome browser
AA seq
467 aa
AA seq
DB search
MQQPGSHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAAIR
ATVFNDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTS
TAALPMQRYNFVPIELLKQREVGSLVDVLGVVLKVDDVSSITQKSTGRELVKRNVKMGDM
TAAVEVTFWNDEAQTWGYPVGTVVALRQLKVGSFDGVTLSSTYQTKIDVNPTDLPDVKKL
ATWYVSTGGANVTSLSSQGLGAINGAGGENDRGRKYLDEIQSEGIGRGLKPEYVDVRCVP
IYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWL
TLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEE
SDRLRMSVVRISEFMPIAGTSEDTRRRLAQNLRAECDEILRLIEAYV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgggcagccaccagatccagcccatcgactcccttacaccgtttctcggt
ggcaagtggtggattcgggcacgtgtgacagacaagacggacatccgtacctggaacaag
ccgacgtcgcaaggaaagctcttctcctttaccctcattgacgagtctgccgcgattcgg
gcgacagtcttcaacgacgccgtggacaccttcgaaccgctcatcgtcaatggacaggtg
tactacttcagcggtggccaggtgaagaatgcaaaccggcgtttcagcaacgtgaacaat
gactacgagctcacgttcgaccgcagctcggagattatgttggcgcggcaggacacatca
accgcggcgctaccgatgcagcgctacaactttgtgccaatcgagcttctaaagcagcgc
gaggtcggctcacttgttgacgtgcttggtgtcgtgctcaaggtagacgatgtgtcatcc
atcacgcagaagtcgacaggccgcgagctggtaaagcggaacgtcaagatgggcgacatg
acggcagctgtggaggtcaccttctggaatgacgaggcgcagacttggggctacccggtc
ggcaccgttgtggcgctgcggcagttgaaggtcggcagttttgacggcgtgaccctctcc
tccacctaccagactaagatcgacgtcaaccccaccgacctgccggacgtcaagaaactc
gcgacgtggtacgtgtcgactggcggcgcgaacgtgacgtcgttgtcgtcgcaggggctt
ggcgcaataaacggcgccggtggcgagaacgaccgcgggcgcaagtacctcgacgagatc
cagtcggaagggatcggccggggactgaagcccgagtacgtcgacgtccgatgcgtcccc
atctacttcaaacaggacgcccagtggtacgacgcgtgcccgacgtgcaacaagaaggtg
accgaggagggtgctcagggagatcgcttccgctgcgagaagtgcgacaagacggttaca
ccaacgcagcgctacctcgtctccatccaggtcacggacaacgtctctcaggcgtggcta
acgctgttcaacgaagccggcatcgagttcttcgggatggaggcggcggagctgaagagg
cgtgcacaggaggaccccctctacatcgcgaagttagcacagggccgcatgaacaggccg
gtggtgatgcgtctgcgcgtgaaggaggagacgagctcgaacgccatgaccggcgaggag
tcggaccggctgcgcatgtcggtggtgcgcatttcagagttcatgccgattgctggcacc
tccgaggacacacgccgccgcctcgcgcagaacctgcgcgcggagtgcgatgaaattcta
cgcctcatcgaggcgtacgtgtga
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