Leishmania braziliensis: LBRM_30_0620
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Entry
LBRM_30_0620 CDS
T01113
Name
(RefSeq) putative nuclear cap binding protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
lbz
Leishmania braziliensis
Pathway
lbz03013
Nucleocytoplasmic transport
lbz03015
mRNA surveillance pathway
lbz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LBRM_30_0620
09122 Translation
03013 Nucleocytoplasmic transport
LBRM_30_0620
03015 mRNA surveillance pathway
LBRM_30_0620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbz03019
]
LBRM_30_0620
03041 Spliceosome [BR:
lbz03041
]
LBRM_30_0620
Messenger RNA biogenesis [BR:
lbz03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
LBRM_30_0620
Spliceosome [BR:
lbz03041
]
Common components
Common spliceosomal components
Cap binding complex
LBRM_30_0620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
5417587
NCBI-ProteinID:
XP_001566695
UniProt:
A4HI05
A0A3P3ZCC0
LinkDB
All DBs
Position
30:complement(205917..206483)
Genome browser
AA seq
188 aa
AA seq
DB search
MSSDLVDKVPRMQYVDRHELLRSLLTTEEFQERRQEQLNYSTTVYVGNLSFYTTEEQLYS
HFSPCGHIRDIVMGLNEATRCPCGFCFVVFESQAAAVLAVQGLDGSLLDDRVVSVSWDVG
CDGSRRWGRGAHGGQVVDGIRQNLDEGRGGLGALRRDALGVTASTTEEELVSYEWVAAPP
KRRGATTK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgatttggtggacaaagtcccccgaatgcagtatgtggatcgccacgagttg
cttcggtctctcctgacgacggaggagttccaggagcggagacaggagcagctcaactac
agcactaccgtgtacgtgggcaacttgtccttctacacgacggaggagcagctgtacagt
cacttcagtccttgcggacacatccgcgatatcgtaatgggtctcaacgaggcaacgcgg
tgcccatgcgggttctgctttgttgtgttcgagtcacaggcggccgcagtgctggcggtg
cagggactcgacgggtcgctgctggacgaccgcgttgtgtccgttagctgggatgtaggc
tgtgacgggagtcgccgctggggccgcggcgctcacggcggccaagtggtggacggcatt
cgccaaaatctcgacgagggtcgtggcggcctgggcgccctacggcgcgacgcgctgggc
gtgactgcctcgaccacagaggaagagctggtttcctacgagtgggtggcagccccgccg
aagcgccgaggagccaccacaaagtag
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