Leishmania braziliensis: LBRM_30_1410
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Entry
LBRM_30_1410 CDS
T01113
Name
(RefSeq) putative vacuolar assembly protein vps41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
lbz
Leishmania braziliensis
Pathway
lbz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LBRM_30_1410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbz04131
]
LBRM_30_1410
Membrane trafficking [BR:
lbz04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
LBRM_30_1410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_HPS5
zf-RING_Vps41
LysM
zf-RING_2
zf-C3HC4_2
zf-RING_16
zf-rbx1
zf-C3HC4
EIF3I
Beta-prop_EML_2
WD40_Prp19
zf-ANAPC11
Beta-prop_TEP1_2nd
zf_RING_Vps8
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
5417666
NCBI-ProteinID:
XP_001566771
UniProt:
A4HI81
LinkDB
All DBs
Position
30:457354..461949
Genome browser
AA seq
1531 aa
AA seq
DB search
MRTYTGRRLLHGLLRYRDFAHRSPQPLLTSLSSPQHAQGGGLPCCSLSLLFSSLLAQQHR
RRHLCTPPPHTHTHIPTHSFLIHMQRPGSSGGTSVSSSLPSPSPVSVHDADHTHDGKLAS
ASLRRRDDGSRASSSSARASHHTLEKGEGARRRVTRHNSPGGSDKADGDGIDSTEDPSYT
SYYEYNSDYDEEDADCFDSDSYRDSGNVDGYRSSTTGSLPPQEDLLRFLSYTLDEAALKD
HRLMAIEAFRHILVLGTNQGTVAVIDPSSGKVKEVYTNHHEPICDVDCTVNELYIAACDK
AGYVTIQSRRDVKDVWMAELSGPINSVALHPLYHKMDSCPMLCGGATKVHLLTKGLLWSN
SRRVTTLQEGRGRIHKVRWCHATAIDVAAWLSDAELTLYDIKNQAVVRRVPLPGLSAQNA
LYPPTLRWEYNLSRDPTAAASPTAALLSGWGDVVQEVQLYAGLPVRRQSGGGIFSAGGSP
RSTMSQDGCLNASSSLSPLRQASDSPALAPSRPSTTAADATGRGPYVVELRTPQPLRPSS
TLFPYRVCGIAPYGPQRYVVLACIIEHGMEGVMKDLEVRVVDRGSLTDIYRGRMPIRFIH
PLQLHLTYLELLPSLAARSASLRQLALPPDPLAPSPMTQYFILSVDTIVKAIPSDIDDHV
EFLLRTGQFERAYRYAVAYARQLRRHVLEHVGQQWLMHLFHNRNTEDGALRKIVELLPEL
IPRDSSAAWEQWIYRLDTCGESWRLVALLPASTGASAEYRVGSTSDVEEVEDTHVEHAFA
MTRSLPPPVATLQTPIQREYYDLVLLRCLRHDPRLFYAALHKFNTLFSVPVVLKATEVAH
REQCATAAWWEDNDSDEEEGETEGEHGQTRKVTVSDAGPTLSAANADESGVQSVSPASSL
PTTPQGTSAETSTTGAAPHPSQVTTSGAGATSTPSMSRTSRWSLAASYGFLLRCAGRHEE
ALQVLLRLPASPRSDREVFGLIRDQQLFHKARELLPELLHRREGATLQLLMEHVAGSTAG
SGVTSGAGEAVATSPAFVAPSGGAPASSLSSTALQYGSAQDPLCAESVISRLEHSDRLHL
LRYLNLVQQLYPEVFAHIAKQHAQLLATLYIDYDRSSLLPFLKQMSMYIERIRELHALCH
KHHFLEEEIFLLFRMGREDEALRILVEKMHDLPRALRFVVSVPDLEEQAALFTRLVDYTV
AYNASLPTCNLDSTKGATGGFGVRVRYVIHHTKPNETYASIAQKYHVALGDLCQVNGVSR
ASGGVESSKRRKSSSTSVQGEGEGQRHAPCDTDAAENSPVPPPQCIVPLNLFGNLFETLA
ESQFMEYPALDVRHVLRKLPSREPILHAGPSIAAIAHAMEEEVAFFSTVSKVGEKDLMGY
YGQLLKRRTAAIAMGQRRDLAVSGASTSTGAATTVMHVADELSEVSGVAHRCAACCQLVI
QRVVVFACQHIYHPHCVLQYLKKSPPDAFIGGGGVGFGVRAGDAVAVMHDDASIALPVTS
SAAAGAETTEEQLRKLPVYCRACRQHSGGQS
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacctacactggtaggcgactgctgcacggtcttctgcgctatcgtgactttgct
cataggtcgccgcaaccgctgctcacatccctctcctctccccaacacgcgcaaggggga
ggactcccgtgttgttctctctctctcttattttcctctttgctagcacagcagcacaga
cgccggcacctttgcaccccccccccccacacacacacacacatacctacccactccttt
ctaatccacatgcagcgtcccggcagcagcggcgggaccagtgtgagctcatcgcttccg
tcgccatcgccggtgtctgtgcacgatgccgaccacacgcacgatggaaaactcgcatct
gcatcattgcggcgtcgcgacgatggcagccgagcgagcagcagcagcgctcgtgcttct
caccacacgcttgaaaagggagagggtgcccgccgtcgtgttactcgacataattctcct
ggtggcagcgacaaagctgacggcgatggcatagacagcaccgaggaccccagctacacg
agctactatgaatacaacagcgactacgacgaggaggatgcggattgctttgacagcgac
agctaccgtgacagcggcaacgtggatggctaccgatcctcgacgacgggctctctgccc
ccacaagaggatctcttgcgatttctcagctacacgcttgacgaggccgcgctgaaggat
catcgactcatggcgatcgaagctttccgtcacatacttgtgctcggtacgaaccagggc
accgttgcggtcatcgatccgtcttccggcaaagtcaaggaggtgtacacaaaccatcac
gagccgatctgcgacgtggactgcaccgtcaatgagctctacatcgcagcctgcgacaag
gccgggtacgtcacgattcaaagccgccgcgatgtgaaggacgtgtggatggcggagcta
agcggcccgatcaactccgtcgctttgcacccactgtaccataagatggacagttgcccg
atgttgtgcggcggggcgacaaaggtacatctcctcaccaaaggtttgctgtggagcaac
agtcggcgcgtcacgactctgcaggaaggacggggacgcattcacaaggttcgttggtgc
cacgcgaccgcgatcgatgtcgccgcgtggttatcggatgcggagctcaccctctacgac
ataaagaaccaggctgtagtacgccgcgttcccttgcccggtctctccgcccagaatgct
ttgtacccgcccacgctgcgatgggagtacaatctctcgagggacccgaccgcagctgcc
agccccacggcagcgttgctgtctggatggggagacgtggtgcaggaggttcagctgtac
gctggcttgcccgtgcgtcgacagagcggcggaggcattttcagtgcaggtgggtcgcct
cgctccaccatgtcgcaagacggatgcctaaacgcgtcctcgtcgctgtccccgctgcgt
caggcatctgacagtcctgctctggccccatcgcgaccatcaaccaccgctgctgatgcg
actgggcgggggccgtacgttgtagagctgcgcacgccacagccactgcgaccgagcagt
accttgtttccctaccgagtttgcggcatcgccccctatggcccgcagaggtacgtggtg
ctggcatgcatcatcgagcatggtatggagggagtgatgaaggacttggaggtgcgagtg
gtggaccgcggctccttgacagacatctaccgtggtcgcatgcccatccgcttcatccac
ccattgcagcttcacctcacctatctcgagctgctgccgtcgcttgcggcgaggtcggcg
tcgctgcgccaactcgccttgccaccggacccgttggcaccgtctcccatgacgcagtac
ttcattctctctgtcgacacaatcgtgaaggcgatcccatcagacatcgatgaccacgtc
gagttcctgctgcgcacaggtcagtttgagcgtgcctaccggtacgccgtggcatatgcg
cgccagctgcggcggcacgtcctggagcatgtgggacagcagtggctcatgcatcttttt
cacaaccgcaacacagaggatggggcattgcggaagattgtcgagctgcttcctgagctc
attccacgtgacagcagcgctgcatgggagcagtggatctaccgcctggacacatgtggt
gagtcatggcggctcgtcgcgctcctgccagctagcacgggtgcctccgccgagtacagg
gtgggcagcacgtccgacgtggaggaggtggaagacacacacgtcgaacacgctttcgcc
atgaccaggtccctgccccccccagttgccaccctgcagaccccgattcagcgggagtac
tacgacctggtgctgctacgctgtctccgccacgacccgagactcttctacgctgcgcta
cacaagtttaacacactcttcagcgtacccgtcgtactgaaggcgacagaggtggcgcat
cgagagcagtgcgccaccgccgcctggtgggaggacaacgacagcgacgaggaggaaggc
gaaaccgaaggcgagcatgggcagacgaggaaggtaacggtgtctgacgccggtcctaca
ctcagcgccgccaacgctgatgaaagtggcgtgcaatcagtgtcgccagcttcttccctg
ccgaccaccccgcagggcacctcggcagagacgagcaccacaggggcagccccgcatcca
tctcaggtgaccacgtcaggtgccggagctacttctaccccgtcaatgagccgcacttcg
cggtggtcactggcggccagctacggtttcctcctccgctgtgcaggtcggcacgaggaa
gccctgcaagtgttgctgcgcttgcctgcctctccacgcagcgatcgtgaagtgtttggg
cttatccgcgaccagcagcttttccacaaggcgcgcgagcttcttccagagttgctgcac
aggagggaaggtgctacactgcagctgctcatggagcacgtggcagggtcaacggccggc
agcggcgtgacaagcggcgctggcgaggccgtcgctacttccccagcattcgtcgcacca
agtggtggcgccccagcatcttcgctgtcttcgactgcgttgcagtacggctctgcgcag
gacccactttgtgccgagtctgtcatcagccggctcgagcacagtgatcgactgcacttg
ctgcgctatctgaacctcgtccagcagctttacccggaggtgttcgctcacatagcaaag
cagcacgctcagctgttggcgaccctctacatcgactacgaccgctcatctctgcttccg
tttctcaagcagatgtccatgtacatcgagcgcattcgtgaattgcacgcgctctgccac
aaacaccacttccttgaagaggagatctttcttctctttcgcatgggccgcgaggacgag
gcgctgcgcatccttgtggagaagatgcacgacctaccccgcgccctgaggtttgtcgtc
tctgtcccagaccttgaggagcaggcggcgttgttcacgcggctggtcgactacaccgta
gcatacaacgcgagcctgccaacttgcaaccttgacagcacgaaaggcgccacgggcggg
tttggcgtgcgcgtgcgctacgtgatacaccatacaaagccaaatgagacgtacgcgtcg
attgcgcagaagtaccacgttgcactgggagacctgtgccaggtgaacggcgtgtcgaga
gcctccggcggtgtggagagctcgaagaggcgcaagagcagcagcacctctgttcaaggc
gaaggagaagggcagagacacgcaccctgcgataccgacgcggcagaaaattcgcctgtt
ccaccgccgcagtgcatcgtgccgctcaacctctttggcaaccttttcgagacgcttgca
gagtcgcagttcatggagtatcccgcgttggatgtgcggcacgttcttcggaagcttccg
agccgtgagcccatcctgcacgccggacccagcatcgccgccatcgcacacgccatggaa
gaggaggttgcatttttttccaccgtatccaaggtcggtgagaaggacttgatgggctac
tatgggcagctgctgaagcgacgcaccgcagcaattgcgatgggtcaacgccgagacctc
gccgtgagcggcgcgtccaccagcaccggcgctgccacgacggtcatgcatgtagcggac
gaattgtcggaggtttctggagtggcgcatcgatgcgcagcttgctgccagctggtcata
cagcgggtggttgtctttgcgtgtcagcacatataccacccgcactgtgtactgcagtac
ctcaagaagtcaccgccggacgccttcatcggaggagggggcgtgggttttggtgtccgc
gctggggacgccgttgccgtgatgcacgacgacgcgtcgatagcgctgccggtgacatcc
agtgcggcggcaggagcggagacaacggaggagcagcttcgcaaactgccagtctactgc
cgcgcctgccgtcaacactccggagggcagagctga
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