Leishmania braziliensis: LBRM_31_0270
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Entry
LBRM_31_0270 CDS
T01113
Name
(RefSeq) putative DNA-directed RNA polymerase II subunit 2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03020
RNA polymerase
lbz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBRM_31_0270
09124 Replication and repair
03420 Nucleotide excision repair
LBRM_31_0270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbz03021
]
LBRM_31_0270
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_31_0270
Enzymes [BR:
lbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBRM_31_0270
Transcription machinery [BR:
lbz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
LBRM_31_0270
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LBRM_31_0270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
C1_1
APO_RNA-bind
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
5417933
NCBI-ProteinID:
XP_001567028
UniProt:
A4HIZ1
A0A3P3ZDC0
LinkDB
All DBs
Position
31:complement(71044..74601)
Genome browser
AA seq
1185 aa
AA seq
DB search
MAQDELLDLEDPDMVLDDGFIDERDDENPNDDLDSEDIWEVISSFFREKGLVHQQLDSYN
DFLMRIPKMIESMAVIPRQDDQYDPGVTMEEQRDQPRLVLQDVVIGNPSHQTHSYFAGGP
LPPLFPNECRLRDMTYDAQAQVTLGVELYHPHADTPHDTFLRNVELGRIPIMLKSMRCNL
SGKDEDELPRLNECPHDQGGYFVINGTEKVLIAQERQAANHVYTFSRQKGLLCEVKSIVE
GSLNKPRTLQIIMPYRNRGPGSGFESLMCRVAQMDETIPLFVLFRAMDMVADKEILQTVV
PDLKDTAMLELLRGSMSDASTLQIFTREEALGYIGRRLGKQDAMANLQREAESLLMRDLL
PHMGTDPSANRTKCLYMGYMVHKLLLVALGRHEETDRDFLGHKRIDVAGTLLTVQLQTFL
AQVRKEMIKTLQDHAANPRGVFSFGRVIHSRLVTDGLRRCLATGNFGDLKTGNIKTGVAQ
TLNRLTYSSSLSNLRRIQNPIAASSKATRPRNLHCTQWGYICPVETPEGGSIGLLKNVAL
MCLMSRGTDHAEVVQAVQARIDGFRTIGLEDTADVRVARVFVNGTMIGVDRNPERLLHDL
RTRRRNGELSNEVSIVRDIRDREIRVFSDGGRCLRPLFVVENCHLKLRKSSMRDLLVSEK
AGGKKSISWNTVLKKGYVELIDCEEEDSLLVAMTPSEVEKNYYYSHCEMDPSMILGICAS
IIPYPNHNQSPRNTYQSAMGKQAMGIYASNFNMRMDTTAHVLFYPQKPLVRTKAMTYMHS
NDLPAGHNAVVAISCYSGYNQEDSIIMSRSAVERGFFRSAFWRSFKAKEERQKRDALETF
ENPNREVCRVKRADYSKLDTDGLIKPGMRVLGGDVVVGKTIPLPEADLDKLTTGNTKITK
RDASITSRTTEKGVVEKVMLTMNSSDRFAKVKIRTIKIPNIGDKFCSRHGQKGTNGIQFR
QEDMPFNRDGVVPDLIINPHAIPSRMTVAHLIETLAGKVACYKGGEVYATPFCSVVVDDF
GKALHALGSQRYGNECLYNGHTGLPLDHLIFFGPTFYQRLKHLSGDKIHARPRGPLQPLV
RQPTEGRAHEGGLRFGEMERDCMLSYGASQWLRERLFRVSDYYTVHVCNHCGTICVADTK
LNRYQCKGCENDTRISQVLMPYACKLLFQELMSMTILPRLGTGPL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggatgagctactggatctggaagaccctgacatggtcctcgatgatggcttc
atcgacgagcgcgacgacgagaaccccaacgacgacctcgacagcgaggacatttgggag
gtcatctcatccttcttccgggagaagggactcgtgcatcaacagttggattcgtacaac
gacttcctcatgcgcatccccaagatgatcgagagcatggctgtcatccctcgccaagac
gaccagtacgacccaggggtcacgatggaggagcagcgcgaccagcctcggctggtgttg
caggacgtggtgattggcaacccgtcgcaccagacgcactcgtacttcgccggtgggccg
ctgccgccgctcttcccaaacgagtgccgtttgcgcgacatgacgtacgacgcgcaggcg
caggtgacactcggagtggagctgtaccacccgcacgccgatacgccgcatgacaccttc
ctgcgcaatgtcgagctgggccgtattcccatcatgctcaagtccatgcgctgcaaccta
agcggcaaggatgaggatgagcttccgcggctcaacgagtgcccgcacgaccagggaggg
tactttgtgatcaacggcacagagaaggtgctcatcgcgcaggagcggcaggctgccaac
cacgtctacacattttcccgccagaaggggctgttgtgcgaggtgaagtcgattgtggag
ggatcgctgaacaagccgcgtacgctgcagatcatcatgccgtacaggaacagaggcccc
ggcagcggcttcgagagcctcatgtgccgcgttgcgcagatggatgagacgattccgctg
tttgtgctgtttcgggcgatggacatggtggcggacaaggagatcctgcagacggtcgtg
ccggacctaaaggacaccgcgatgctggagctgctgcgtggctccatgagtgacgcgagc
acgctgcagatcttcacccgcgaggaggctctcggctacattggccggcgcctcggcaaa
caagacgccatggcgaacctacagcgggaagcggagagcctgctgatgcgggacttgctg
ccgcacatgggcacggacccttccgccaaccgcacaaagtgcctgtatatgggctacatg
gtgcacaagctgctgctcgtcgccctcggccgccatgaggagacggaccgtgactttctg
gggcacaagcgcattgacgtggcaggcacgctgctgacggtgcagctgcagacctttctc
gcgcaggtgcggaaggaaatgatcaagaccctgcaggaccacgctgccaacccgcgcggc
gtcttcagcttcggccgtgtcatccacagcagacttgtcactgacggtctgcgccgctgt
ctcgccaccggcaacttcggcgacctcaagacgggcaacatcaagacaggcgtggcgcag
acgctgaaccgtctcacctactcgtcttcccttagcaatctgcgtcgcatccagaacccc
attgccgcctccagcaaggcgacacgcccgcgcaacttgcactgcacgcagtgggggtac
atttgccctgtggagacgccggagggcggctcgatcgggctgctcaagaacgtggcgttg
atgtgtctcatgtcccgcggcacagaccacgccgaggtggtgcaggccgtgcaggcgcgc
atcgatggcttccgcaccatcggtctcgaggacacggctgacgtgcgtgtggcgcgtgtg
ttcgtgaacggcacaatgattggcgtggaccgcaacccggagcggctgctgcacgacctg
cgcacgaggcgccgcaacggcgagctcagcaatgaggtgagcatcgtgcgcgatatccgc
gatcgcgaaatccgcgtcttctcggatggtggtcggtgtctgcgccctctcttcgtggtt
gagaactgccacctaaagctccgcaagtccagcatgcgcgacctgctcgtctcggagaag
gcgggcggaaagaaatccatctcgtggaacaccgtgctgaagaagggctacgtcgagctg
attgactgcgaggaggaggactcgctgctggtcgccatgacgccgagcgaggtggagaag
aactactactactcccactgcgagatggacccgtcgatgattcttggcatttgcgcctcc
attatcccctaccccaaccacaaccagtcgccgcgcaacacctaccagtccgccatgggt
aagcaggccatgggcatctacgcctcgaacttcaacatgcgcatggataccaccgcccat
gtcctcttctacccacaaaaaccgctggtgcgcaccaaggccatgacgtacatgcacagc
aacgacctgcccgccggccacaacgcggtggtggccatctcgtgctacagcgggtacaac
caagaggactctatcattatgagccgctccgccgtggagcgcggcttcttccggagcgcc
ttttggcgctccttcaaggcgaaggaagagcggcagaagcgcgacgcgctggagaccttc
gagaacccaaaccgcgaggtatgccgcgtgaagcgtgccgactactcgaagctggacacg
gacggcctcatcaagcccggcatgcgcgtcctcgggggcgacgtggttgtgggcaagacg
atcccgctgcccgaggcagacctcgacaagctcacgacgggcaacacgaagatcacgaag
cgggacgcgagtatcacctcgcgcactacggagaagggcgtcgtggagaaggtgatgttg
acgatgaacagcagcgatcgcttcgccaaggtcaaaattcgcaccatcaaaatccccaac
atcggcgacaaattttgcagccggcacggccaaaagggcaccaacggcattcagtttcgc
caggaggacatgcccttcaatcgcgacggcgtcgtgccggacctcatcatcaacccgcac
gccattccctcccgcatgacagtggcccacctgatcgaaacactggccggcaaggtggcg
tgctacaagggcggcgaggtatacgcgacaccgttctgttccgtcgttgtggacgacttt
ggcaaggccttgcatgccctcgggtcgcagcggtacggcaacgagtgcctctacaatggg
cacacagggctgccgctggatcatctgatcttcttcggccccaccttctatcagcgcctg
aaacacttatctggagacaaaatccacgcccggccacgtgggccgctgcagccgctggtt
cgtcagccaaccgagggtcgcgcgcacgagggtgggctgaggtttggcgagatggagcgt
gactgcatgctctcctatggtgcctcgcagtggctgcgggagcgcctcttccgcgtcagt
gactactacacggtgcacgtgtgcaatcactgtggcaccatctgtgtggccgacacaaag
ctcaaccgctaccagtgcaaaggttgcgaaaacgacacgcgcatctcccaggtgctcatg
ccgtacgcctgcaagctcctcttccaagagctcatgtccatgacaattttgccgcgcctc
ggcaccgggcctctgtga
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integrated database retrieval system
