Leishmania braziliensis: LBRM_31_1860
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Entry
LBRM_31_1860 CDS
T01113
Name
(RefSeq) TATE DNA Transposon
Organism
lbz
Leishmania braziliensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
Phage_integrase
Peptidase_A17
Motif
Other DBs
NCBI-GeneID:
5418092
NCBI-ProteinID:
XP_001567182
UniProt:
A4HJE5
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Position
31:complement(join(818387..820360,820363..823308))
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AA seq
1639 aa
AA seq
DB search
MWGGDMREGKTSNIELDVIYKAYLPKKRIVPSDTMVHLDWKRAQQLAAKVHRHGVVFFPI
FIMKHWIAGLLEKGTQDSAEIQLSILDSAPSPIVEEKLRKHFKMVWPALRLVNEFSPRQE
RYSDDCGLYMSAVFFGVHLDIQIDHSRDMAKCMRRLLYAASKHHPPREYFLEKMRKILTN
HPVSRKDFFYNEIEHKPWLKKTTVNREDTFHLGGGERRATKSTNPKRDSRRANQPKARAP
KPPPRQKKKEETVRTKMDRAERTKRTPQTPVPASKAPSRKRPERSAMDAPLPRRKAARKS
DRRTPASSSGRSATGRNGDKTRSLNSSEFPSEDEDLPVIDLPRRKKNSVTRTPEHAPNDA
TVSSEGIIPTNVSPHVQHGKCISEWTEITLAEANKHARKVYEAVLDHLWAATALARVGDG
VAHGLTDTAVGQQRVRHKLTPLQPYSVQEMLKLLRKKIHMVDASPTDPNGVILREENRSE
EVTLDSSIDELYLVRGPSLPTLYDVIKGYRFLLGACLREAPADVNGVRYPSHYVLTKDAS
EATVGVYVPATWTHYQSSKRQRAPRHASRYIPLPRSAASEAHQDPSDGQRPRLVKRKRWP
GDGAGRDPLQEDEEDGATYRTPGNQKGDGYADVDANISTEAMRALESLRSNPLNMQGRHL
SKNEEAEVCPRNWFLFAAKPPHISQLAWNLVRPDTRAHHLRWLTRIKSMNSEQMLMRFPA
ACIDLILSTARARKWKWATTAKAFAAVAGALRDLPLYSTQTRGIRLQDDPEWRSAFGTVQ
RYMKESVPDAPPFVSRRQVEAIIGRLRLGHPRAALFLAMMWGFAARACDISTLRAKDVTL
FPGPPTSTRVKVTLTIRKGKGAKTRGPYPVPSMLTRDLAATLQEMLVQKKPSEELFAPHV
EELRALIAQEVRTEMRGAQLPSIRKGALRCMAEAGVPLKDLMMISGHAKQATLLRYLGYG
QQPTVEAETARDNAGRALFQTLEAAASVFRFRSQESSCANLGIAPQEVAAMVDQMSGFIQ
VLTERPALVKQWPLHLKRNTPLDMDTVLAMPTKRASTKRFLQRIQCFLDPSFYDGLRTSR
TIKKCALTAAEIQQAVEMGKFEPCPISDIGSQVQLPEGMHGVNVFTVPELKGRRRLITEP
LLNRVIPKHHVPRVHYDTRLGRRQRLRYARYMLQIDFEAYYDAIPIAATLRNKFVFRARH
DGRYYRLRTLPTGARWSVAVGQAVTWTIVDIDTPVTITTLIDNILVAAREGQEREFVLAV
RTVVARIKAANLMTSPNRDELEAMSDEEILQLASANTVFLGEEYTWNGRERLIRNSVKTV
AKLKLALQKTSHTIRSLASLISLIFFALHTTQMNPARAFKLLRAYRGIYRLTFRGYDWDD
AVPYIDSSVARSLQEIGGALVQNPWWKISDERHPTTDEATYDAVAFTDASLEGWGAVLHL
RDAGATEMWTYRQRWTEDLERQLGGDDGEAERVLEKLRQYQLRRRVRSGGRFEDPDLQAD
RFQARYSAHAEPRAAQLMLRHLVEHHRVPNGARIALATDHRAIVIAQKHLNGFGGIGRGY
ALNKLFEYTYDLWYNRGIDVVFFYVEGARNPADAYSRHFGVDATGSLEVHRVEPFGVPFL
RHMWCPLCEERRREEGGEI
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcggtgacatgcgcgaggggaaaacatcgaatatcgaactcgatgtgatctac
aaagcgtacctccctaagaaacggatcgttccgtcggacacgatggtgcaccttgattgg
aaacgcgcgcagcagctcgcggcaaaggtgcaccgtcacggcgtggtgtttttcccaatc
ttcattatgaagcactggatcgcagggcttttggagaaagggacgcaggactcagcagaa
atacagctgagcatcctggactccgcaccttctcccatagtggaagaaaaactgcgtaag
cactttaaaatggtctggccagctttgcgtttggtgaatgaattttcaccacgtcaggaa
cgctatagcgacgactgcggtttgtatatgtctgccgtatttttcggcgttcatctggac
atacaaatcgaccatagccgagatatggcaaagtgcatgcggcgcctgctttacgcggcg
tcgaaacaccacccgccacgcgaatatttcctcgaaaaaatgaggaaaattctgacgaac
cacccggtgtcacggaaagatttcttttacaacgaaatcgagcacaagccgtggttgaag
aaaaccacggtgaaccgtgaagacacctttcacttgggtggtggcgaaaggcgcgcaacg
aaatccacgaacccgaaacgggattccaggcgcgcaaaccagccgaaagcacgtgctcca
aagccacctcctcggcaaaagaaaaaggaggaaacggtgcgcacaaagatggaccgggct
gagcgcacaaagcgcacgccacagacgcctgtacccgcgtcaaaagcaccttcccgtaaa
cgtcccgagagatccgcaatggatgccccactcccacggcgaaaggccgcgaggaaaagt
gacaggagaacacccgcgagttcctcaggtagatccgcaacaggtaggaatggagacaaa
acacgctctctaaactcgagcgaatttccatccgaggatgaggatctgccggtgatcgac
ctcccgcggaggaagaaaaactccgtcacgcgtacgcctgagcatgcgccaaacgacgcc
acggtgagctcagaaggcattatcccgacgaacgtgtcaccacacgttcagcatgggaaa
tgcatttctgagtggacagaaatcaccctcgcggaggcgaacaaacatgccagaaaggtg
tacgaagcagtcctggatcacctgtgggctgcgacggctctggcgcgagtcggcgatggt
gtggcacacggtctgaccgacacagcggtgggacagcaacgcgtgaggcacaagctgaca
ccactgcagccttacagcgtccaagagatgctgaagcttctccgaaagaagatccacatg
gtcgatgcctcaccgaccgacccgaatggggtgattcttcgagaagaaaaccgaagcgag
gaggtgaccctcgactcctcaatcgacgaactgtaccttgtccgtggaccgtcgttaccg
acattatacgacgtgattaaaggatacaggtttctgcttggcgcatgtctccgtgaggcg
ccggcagatgtgaatggcgtgcgctatccgagccattacgttctcacaaaggacgcctcg
gaggcaacggtgggagtctacgttccagcgacgtggacgcactaccaatcgtcgaagaga
cagcgtgccccacgtcacgcgtcacgatacattcctcttccgcgaagtgcggcatcagag
gcacaccaggatccgtccgatggccaacggccgcgcctggtgaaaagaaaaagatggcca
ggcgacggcgccggaagggacccactccaagaggacgaggaggacggcgcgacgtacagg
actccaggaaaccagaagggtgatggatatgcggacgtcgacgcgaacatctcgacagag
gcaatgcgcgctctcgaaagcctccgctccaatcctttaaacatgcagggcaggcatctt
tcaaaaaacgaagaggcagaggtctgcccgagaaactggttcctcttcgccgcgaaaccg
ccacacatctcacagctcgcatggaacttggtgaggcccgacacccgcgcacaccacttg
cgatggttgacgcgaatcaagtcgatgaactcggaacagatgctcatgcgctttccggcg
gcatgtatcgacttgattctgtcgaccgcaagggcccgcaaatggaagtgggcaaccacc
gcgaaggcctttgccgcggtagcgggtgcgctgcgcgacctgccgctctactcgacgcag
acgcggggtattcgccttcaggacgatcccgagtggcgaagcgcttttggcacggtgcag
cgttacatgaaggagtcggtgccggatgcgcctccctttgtttcgcgacgccaagtcgaa
gcgatcatcggaagactccgactcggtcaccctcgtgccgcgctgttcctcgccatgatg
tggggattcgcagcgcgagcgtgcgacatttccacgctgcgagcgaaggacgtgacgctg
ttcccgggaccgccgacaagcacacgcgtgaaagtcacgctgacgatccgcaagggaaag
ggtgccaaaacacgcggcccttacccggtcccatcgatgctgacgagggacctcgcagcg
acactgcaggagatgctggtccagaagaaaccatccgaggagctctttgcaccacacgtg
gaggagctgcgggcactgatcgcccaggaggtgcgaacagagatgcgaggtgcacagctg
ccctcgatccggaaaggcgcgctacgttgcatggcggaagcgggtgtcccgctgaaggac
ctgatgatgatctccgggcacgcgaagcaggccacgctgctgcgctatcttgggtatggc
cagcagcctacggtggaggccgagaccgcaagggacaacgccggaagagcgctattccag
accctcgaggctgcggcttccgtgttccgtttccgatcgcaagagtcatcgtgcgcgaat
ctcggaatcgcaccacaggaggtggcggccatggtggaccagatgtccggtttcatccaa
gtgctgacggagcgaccggcactcgtgaagcagtggccgctgcacctgaaacggaacaca
ccactggacatggataccgtgctggcgatgccgacaaaacgcgcctcaacgaagcggttt
ctccagcgaatccagtgctttctggatccctccttctacgatgggttgcggacgtcgagg
accatcaaaaagtgcgcgctcacagcggcggaaatccaacaggcggtcgagatgggcaag
tttgaaccgtgcccgatcagcgacatcggctcccaggtgcaattgccagagggcatgcac
ggcgtgaacgttttcacggtgccggagctgaaaggacgacgacgcctcatcacggagccc
ctgctgaaccgcgtgatccccaaacatcacgtcccgcgcgtccactacgacacgcgcctc
ggaagacgacagcggctgcgatacgcccggtacatgctacagatcgacttcgaagcttat
tacgacgctatcccgatcgcggcgacactccgtaacaagttcgtttttcgagccaggcat
gacgggcgatactaccgccttcgtactctcccgaccggcgcgcgatggagcgttgccgtc
ggccaggcggtgacgtggacgattgtcgacatcgacacgcccgtcaccatcaccacgctc
atcgacaacattctcgtggccgcacgcgaaggtcaggagcgtgagtttgtgctcgcggtg
cgcacggtcgtcgcacgcatcaaggcggcgaacctgatgacgtcacccaaccgggacgag
ctggaggcgatgtcggacgaggaaatcctgcagctggcgagtgccaacaccgttttcctc
ggcgaggaatacacatggaatggccgagagcgtctgatccgcaactcggtgaagacggtg
gcgaagctgaagcttgcgctccaaaagaccagccacaccatacgcagtctggcctcgctg
atctcgctgatcttcttcgcgctccacaccacgcaaatgaaccccgcacgggcattcaag
ctgctgagagcctaccgaggcatataccggctgacgttccgcgggtacgactgggacgac
gcggttccttacatcgactcctccgtggcgcgatcgctgcaggagatcggcggcgcactg
gtgcagaatccgtggtggaaaatctcggacgagagacacccaacgacggatgaagcgacc
tatgacgcggtggccttcaccgacgcgtcgctggagggctggggtgctgtacttcacctc
cgcgacgcgggcgccacagaaatgtggacctatcggcagcgctggaccgaggacctggaa
cggcaactcggcggcgacgacggcgaggcggaacgcgtcctcgaaaaactgcgccagtac
cagctgcgtcgccgcgtccggtcgggaggccggttcgaggacccagacctgcaggcggac
cgcttccaggcgcggtactcggcacacgcggaaccacgcgcggctcaactaatgctgcga
cacctggtggagcaccacagggtgcccaacggagcgcgaatcgcgcttgccacggaccac
cgtgcgattgtcattgcgcagaaacacctgaacggtttcggcggcattggcagaggctac
gccttgaacaaacttttcgagtacacctacgacctctggtacaacagagggatcgacgta
gtctttttctacgtcgagggtgcgcggaatccggcggacgcctactcgcgacacttcggg
gtggacgcgacagggtcgctggaggttcaccgggttgaaccgtttggcgtgccgttcctc
cggcacatgtggtgtccgctatgtgaagagcggcgccgcgaggagggcggcgagatatga
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