Leishmania braziliensis: LBRM_33_1960
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Entry
LBRM_33_1960 CDS
T01113
Name
(RefSeq) putative DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03030
DNA replication
lbz03410
Base excision repair
lbz03420
Nucleotide excision repair
lbz03430
Mismatch repair
lbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBRM_33_1960
03410 Base excision repair
LBRM_33_1960
03420 Nucleotide excision repair
LBRM_33_1960
03430 Mismatch repair
LBRM_33_1960
03440 Homologous recombination
LBRM_33_1960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbz03032
]
LBRM_33_1960
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_33_1960
Enzymes [BR:
lbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBRM_33_1960
DNA replication proteins [BR:
lbz03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
LBRM_33_1960
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
LBRM_33_1960
MMR (mismatch excision repair)
DNA polymerase delta complex
LBRM_33_1960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
REV3_N
divDNApol
EIF3E_C
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
5418899
NCBI-ProteinID:
XP_001567964
UniProt:
A4HLN0
A0A3P3ZG32
LinkDB
All DBs
Position
33:738710..741808
Genome browser
AA seq
1032 aa
AA seq
DB search
MSSSTLLQWRSIMRASLPAAYLDKHLCFQLLDCCQTKGNPHETVSRVRHTEVPVVRLYGV
TAEGFSVLVHCYNYEPYLWIEAPRNWLPVHSQGFVRELNNQLSNQTRLQDTVVRVEVHQR
RSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLSDRGVSCPGAWDGIRIFPTFESNVIFPL
RFLVDNEIGGSNWLTLTSGKFVSCPLKTSTCQIEVACSHEDVQNHEPLGDYLSIAPFRIL
SIDIECQGRKGLFPEPEHDPVIQIANYCVEYGHESEPLTKTIFTLKSCAPIAGAQVFSYE
TEADMLLAWATFMKALDPDILTGYNICNFDFPYLLNRATALKASDAFHYWGRQVHERTAA
RDKKFQSKQMGNREYTELTLEGRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHH
SIISDLQQGDEETRRRLAVYCLKDALLPVKLLDRLMCIVNNVEMARVTGVPVGWLLERGQ
QIKVFSMLLRKAQKKKLVVPTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLDFASLYPS
IIIAHNLCYSTLVRPADARLYPEDALDRSPTSDVFVKKDVFPGILPEVLQDLLAARKHAR
AMMKDVPMHSLEYKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISASVTAYGRQMIDK
TKNLVEQLYPGTRVLYGDTDSVMVKCVTDEKASDKERLQAAMDFGIEAAERVSSDFLKPI
KLEFEKVYFPYLLMNKKRYAGLLWTNTDQFDKLDAKGIETVRRDNCPLVARMVSGVLNRI
LIHRSVESAIDFVKGTISDLLLNRLDISNLVITKAFSKAEDEYAGAQAHIALVERMRQRD
PASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNNIPIDTQYYLEHQLAPPILRVFE
GVLDDPSVLIKGDHTRHIAISAPSKNAGGLMRFVKVQLQCISCRAVIKEGALCDNCQEKA
PEVYGKIMAKRNHYEAIYSQVWTQCQQCQGSLHQEVICSSRDCPVFYMRKKVQKDLHEQQ
ALLDRFGVVDDW
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctctactctgttgcagtggaggtctatcatgcgcgcatctcttcctgctgcg
tacctggacaagcacttgtgctttcagctcctcgactgctgtcagacgaagggaaatccg
cacgaaacggtgtcacgtgttcgccacactgaggtgccagtagtgcgtctctacggggtc
accgccgagggtttcagcgtgttggtacactgctacaactacgagccatacttgtggatt
gaggcgccacggaactggcttccggtgcattcgcaagggtttgtgcgggagcttaacaat
cagcttagcaaccagactcgtctgcaagacaccgtcgtgcgggtggaggtgcaccagcgc
cgcagtctcatgtacttcaagggcggccagctggtgcctcatctcaagatcgtcgtgcag
ctgccgcagcacatccccaagctgcgcagtctcctctccgaccggggcgtctcgtgccct
ggggcgtgggatgggattcgcatcttcccgaccttcgagtcgaacgtgatttttccgcta
cgcttcctcgtcgacaatgaaattggcggcagcaactggctaacgctgacttccggaaag
ttcgtctcttgccctctcaagacgtcgacctgtcagattgaggtggcgtgttcgcacgag
gatgtgcagaaccacgaaccacttggggactacttgtctattgcaccttttcgcatcctc
tccatcgacatcgagtgccaggggcgtaaaggactcttccctgagccggagcatgaccct
gtcattcagattgccaactactgtgtcgagtacggtcacgagtcggagccgctcacgaag
accatcttcaccctgaagagctgcgcaccaattgccggggcgcaggtgttctcatacgaa
acggaggcggatatgttgttggcatgggctaccttcatgaaagcactcgaccccgacatt
ctgacgggctacaacatctgcaatttcgatttcccatacctgctgaaccgcgccacagcc
ttgaaggcgagcgatgcgtttcactactggggtcgacaagttcacgagcggacggcggcg
cgcgacaagaagttccagtccaagcagatgggcaaccgcgagtatacggagctgacctta
gaggggcgcatcatcatggatgcgatggtggtgatccagcgcgactacaagctacgctcc
tactcactcaactccgtatcacagaactttcttggagagcagaaggaggacgtgcaccac
tccatcatctcagacttgcagcagggcgacgaagaaacacgccgccgcctcgccgtgtac
tgcctgaaggatgcgcttcttcctgtgaagctgctggatcgactcatgtgcatcgtgaac
aacgtggagatggcgcgcgtaacgggtgttccggtggggtggctgctggagcgcggccag
caaatcaaggtcttctccatgctcctgcgcaaggcccagaagaaaaagctggtggtgcct
acggtcgagtacacaggcggcagcgatcgcggctacgagggcgcgaccgtcattgacccg
atcaaaggcttctacaactgccccgtcgcaacactcgacttcgcgtcgctgtatccgtct
atcatcattgcgcacaacctgtgttactcaacattggtgcgcccggcggacgcgaggctg
tacccggaggacgcactcgatcgatcgcccacgtcggacgtctttgtgaagaaagacgtc
ttcccgggtattcttcccgaggtgctacaggacttgctggctgcccgaaaacatgcgcgg
gcgatgatgaaggatgtgcccatgcactcgctcgagtacaaggttctgaacggacgccag
cttgcgctgaaggttagcgccaactctgtgtacggcttcacgggtgctcaggtgggcaag
ttgccgtgcctggagatcagcgcctccgtcacggcgtatggtcggcagatgattgacaaa
acgaagaaccttgttgaacagctataccctggcacgcgtgtgctgtacggcgataccgac
tctgtgatggtaaagtgtgtcaccgatgagaaggcgagcgacaaggagcgtctgcaggcg
gccatggattttggcattgaggcggcggagagggtgtccagcgatttcctcaaacccatt
aagctcgaattcgagaaggtgtactttccgtacctactcatgaacaagaagcgttatgca
ggcttgctgtggacgaacacggatcagtttgacaagctggatgccaagggtatcgaaaca
gtgcgccgggacaactgccctcttgtcgcgcgcatggtatccggggtactgaaccgcatt
ctaatccaccgctccgttgagagcgccatcgattttgtgaaaggcacgatcagcgatctg
ctgctgaaccggctcgacatctcgaatttggtgatcaccaaggccttctccaaggcggag
gatgaatacgccggtgctcaggcgcacattgcccttgtggagcgcatgcggcaacgagac
cctgcatcagcgccgaccattggagaccgcgtggcgtacgttattatcaaggcagcaaag
ggcgccaaggcgtacgaacggagtgaggaccccatctacgtgctcgacaacaatatcccg
atcgacacacagtactatctcgagcatcagctggctccaccgattttgcgcgtgtttgaa
ggtgtactggatgaccccagtgtgctcatcaaaggcgatcatacgcgtcacattgccatc
tccgccccgagcaagaatgccggtgggttgatgaggtttgtgaaggtccagctgcagtgc
atctcgtgccgcgctgtcatcaaagagggcgcgttgtgcgacaattgccaagagaaggca
cctgaggtgtacggcaagattatggcgaagcgcaaccactacgaagcaatttattcacag
gtgtggacgcagtgccagcagtgccagggatcactgcatcaagaggtgatctgctctagc
cgcgactgcccggtgttctacatgcgcaagaaggtgcagaaagatttgcatgagcaacag
gcgctcttggatcgttttggcgttgtggacgactggtaa
DBGET
integrated database retrieval system
