Leishmania braziliensis: LBRM_34_1120
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Entry
LBRM_34_1120 CDS
T01113
Name
(RefSeq) putative pre-mRNA splicing factor ATP-dependent RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LBRM_34_1120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbz03041
]
LBRM_34_1120
03009 Ribosome biogenesis [BR:
lbz03009
]
LBRM_34_1120
Enzymes [BR:
lbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LBRM_34_1120
Spliceosome [BR:
lbz03041
]
Complex A
U2 snRNP components
U2 related factors
LBRM_34_1120
Complex B
LBRM_34_1120
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
LBRM_34_1120
Ribosome biogenesis [BR:
lbz03009
]
Eukaryotic type
90S particles
Helicases
LBRM_34_1120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
AAA_7
ResIII
AAA_19
AAA_16
T2SSE
nSTAND3
Sigma54_activat
TsaE
SRP54
Sigma54_activ_2
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
5419172
NCBI-ProteinID:
XP_001568222
UniProt:
A4HME2
A0A3P3ZH45
LinkDB
All DBs
Position
35:457535..459652
Genome browser
AA seq
705 aa
AA seq
DB search
MEANHSTRNHLTGRAYSSHYFTLLKIREQLPISAAKSRIQKLVSQYQTLLLVGETGSGKT
TQVPQYILELKPERRIACTQPRRVAATSVSERVAEEMDVELGEEVGYSIRFDDKCSEKTR
LKYLTDGMLLREAMVDPLLSSYSVIVLDEAHERTVSTDILIGTLKELLPKRPDLRVVVMS
ATLEEKRFQEYFPKAPLVHISGRMYGVEVYYSKAPEANYVEAAIRTATQIHLYEGEGDIL
IFLTGEDEIETTVERLQNGIRMAEHSSANCHHGPVVVLPLYSALPPSQQRKVFKTAPEGT
RKIVVATNVAETSLTIAGVVFVVDCGFSKQKVFNPKLRVESLLVTPISQASARQRCGRAG
RTKPGKCFRLYTAKSFHSALQPNTYPEILRCNLGSIVLHMKKMGIEDLVNFDFVEPPAPE
TLMRALELLNFLGALDDDGNLTKEGSLMSEFPVDPEMASMLFHSPKFGSSEDIARISAML
SVQNPFITPSNDQRGRAMRCREQFYHPTGDHIAYLNAFNAFYEVNNQSTSWCTENYINPR
VMKQAVNIYRQLVGILRRLNLPINSTYTAQQRHVQHEDAPAELEFANDVRRAIVKGYFTK
VALSLPTKHQFMTLKDDVKCLLFPSTYLNRRPKFVVFNELVLTSNTYIRTVTAVSEDWLL
ESSPSYFAQDEFEGVTKQVFDDIFRRANKEKERRSKRTRSPTGDD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaatcacagcacccggaatcatttaacgggaagagcatacagctctcactac
ttcactcttttgaaaatccgcgagcagctccctatttctgcggccaagtcgcgtattcaa
aagctggtgagtcagtatcagacgctacttcttgttggagaaacagggagtggaaagacc
actcaggttcctcagtacattttggagctcaaaccggagcgtagaattgcttgcacgcaa
cctcggcgtgttgctgcaacaagtgtgagtgagcgtgtcgctgaagagatggatgttgag
ctcggcgaggaggtaggctactctattcgctttgatgacaagtgttctgagaaaacacgc
ctgaaatacctgacagatggtatgcttctgcgtgaggcgatggtggacccgctgttgagc
tcctacagtgtaattgttcttgatgaagctcacgaacgcactgtgtccaccgatatcttg
attggcaccttgaaggagcttcttccaaagcggccggatcttcgggttgtagtgatgtct
gcgaccctcgaagaaaagcgctttcaagagtattttcccaaggcaccgcttgttcatatt
tctggccgtatgtatggagttgaggtatactactcaaaggcgccagaagctaactacgta
gaagcggccattcgcacagcaacacagattcatctttatgaaggcgagggagacattctt
atatttttgaccggtgaagatgaaatcgagacaactgtggaacgcctgcaaaatggtatc
cggatggcagagcacagcagcgccaactgccatcacggccccgttgtagtattgcccttg
tactctgctctaccaccgtcacaacagcgaaaggtgtttaagacagctccagagggaacg
cggaaaatagttgtggccacaaatgtggccgaaacttcattgacaattgccggggttgtt
tttgtggttgactgcggtttctcaaagcaaaaggttttcaatccgaagcttcgagtcgag
tcgctactcgtaactccaattagccaggcgagtgctcggcagcgctgcggtcgtgctgga
cgtactaagccgggaaaatgctttcggctgtatacggcaaaatcttttcactcagcctta
cagcccaatacgtaccctgaaattcttcgttgcaacctcggcagcattgttttgcatatg
aaaaaaatggggatcgaagatttggtcaacttcgactttgttgagccgcctgcacccgag
acgctgatgcgcgcgttagagttgctcaatttccttggcgcactggacgacgatggcaat
cttacaaaggaggggagcttgatgtcagagtttcctgtagatccagaaatggcatcgatg
ctttttcacagccctaagttcgggtcttctgaggatattgcacgaatttctgccatgctg
tcagtgcaaaatccattcatcacaccctcaaatgaccagcgaggccgtgcgatgcggtgc
cgcgaacagttctatcatccaacaggagatcacattgcgtatctgaacgctttcaatgct
ttctacgaggtgaacaatcaaagcacctcttggtgcacagagaactatatcaatcctcgt
gtgatgaagcaggcagtgaatatttaccgtcaacttgtcggaattttgcgccgcctgaat
ttgcctattaacagcacgtatactgcacaacagcggcacgtgcagcatgaggatgctcca
gcggagttggaattcgcgaacgatgttcggcgtgccatcgtgaaagggtacttcacaaag
gtggcgctctctcttccaacaaagcaccagtttatgacactcaaagacgatgtgaagtgc
cttctttttccatcgacatacctgaaccgccgccccaaatttgtagtgtttaacgagcta
gtcctcactagtaacacgtacataagaacggtaacagctgtctccgaagactggctgctc
gagtcgagtccttcgtacttcgcccaggatgagtttgaaggagttacaaagcaggttttt
gatgacattttccggagggcaaacaaggaaaaagagcgtcgttcgaagcgaacacggtca
cccactggtgatgactag
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