Leishmania braziliensis: LBRM_34_2400
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Entry
LBRM_34_2400 CDS
T01113
Name
(RefSeq) conserved hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LBRM_34_2400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbz04121
]
LBRM_34_2400
Enzymes [BR:
lbz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
LBRM_34_2400
Ubiquitin system [BR:
lbz04121
]
Ubiquitin ligases (E3)
HECT type E3
LBRM_34_2400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
FYVE
Motif
Other DBs
NCBI-GeneID:
5419300
NCBI-ProteinID:
XP_001568349
UniProt:
A4HMR9
A0A3P3ZH59
LinkDB
All DBs
Position
35:946370..953263
Genome browser
AA seq
2297 aa
AA seq
DB search
MDIGIYDSKAQVRAVVAEWKAMNFIGLFEAIDVMSISLVMGFERYLRKFDSAAAIPILVD
VCKTFIKENTQGDLIVVSLRALSLIMEHVPSSYEAAQSFHVSLVEISSQAIHRALRTEWT
FVQSNNNAMIEEGLRVMRFISKDDMTGELIHRVPLGDLLTLCTDSRPLVARQALETLLMM
SCKVVMPSELESPSRSFASNIFSVSKWKKLLRSGTDGGKLGRKFSFNRGSSTKATATEGT
VPYADHPVVTQVENVISPLLVSLVEQYAKSLVSIPEHWILLELSLQCLGTLIERALICHR
PHTARALTSPLLPKILFQLILDTESNVTLEPSVRIDRVLLCETTLTLLTSCHRYLMLESL
QLPEARRFFQLILEDSTDEITTLLDDPFPRAVIATRSTQNRDKDHITSIAALQLFVLACP
TVPSDAFGLKPKLVLPVHQWMWEDEMRHKNCMIEEQCVLLERSWARLDHHACIPLRLKSA
NVDLRTMTMWKGPNGVHRNIFRAYIPFVYHFADEAALRPIVAVKEAGPCAADGTMLVWKL
TTSETHDRHAMVSTIITKEVNSDTGSSSSTRRGRFKGSITSRTLSEKESTNASASVLPAV
VLNTQLEVPEDHISLTEEYFTSLCIFAKNTSGQMAKQVATCACASMLQLMFLSGASERFE
KLMTKAVLPMCEMCREALISADKATKALALTMIGWMLHHPMAEPCEFTGSALRCGLLDQL
EILSKMALLVHERPTRTATLAEKANTLAGCIVEKIKNSRTLHIGGDAEVNVTSNTTLDRA
FFSEAMLRVQTVLDELQRCQCKAAKDPVATSSSSTTTTADKQGSSACVSKVELDTHESAI
RELLRIFQESNDITAYEVFNAGVASTLLYYLLGDRTLEDVAGDTVVYASGAAASTFQSKT
VSLQGVHMGLIDRNASSWAAMMASGMHVADILAMYMDEKRMECFIQCAVAYPTGMRRLVS
TLTSNLSLQSYLPLVESVVTYNKVVCKTPLQAHDALVMISPLITLCGDAGQRILAAIKNT
TGDISPLPHSDNSVTADGFSSTPAASHPRRAEPKLRKPGLLSSSLARSKAILSRRNEPRN
VTRIAKECCMEGHRLQFIESYRQAHFCNKCHRTIFSGHHCRTCNYNVCVNCYRSYTGNVE
LIRSLASIERNHIHLCATIGDLERWFRTGSTSTKGTQQAPASQSTLNHLERFTTRVLTFL
KRYTEVRNTPAATPFTHASGATAPSFLSSANPTTSISFSVELAKKLLSHPNVVRRLTYKY
LSQFSMRGVLLDEGAPIIPAHATALDAEVQKVLSTAVERQAAHYMVQEAVEERYILYRPS
CGMLPFHETVLSTLYRRAFALGDYQLLLKLENCLLRLDGTVEEPLTLQANSAVTVANPAA
VSSGRHLNMKFIKKSKSVKSPLAGGRTWSFSSSASITAGKPITASEEKLVEERELEGNSA
VKNKTYIFHHFESDSAACCACGAHSRAEFHTEEPPALIFTAPDFAHRADMLLLIMLHRVL
FEETHGLIAYAAEAKDIFGGDDSIFENSAITNTLVRSLEASALRVSMLPPLYALPRWVNF
VLREGRFLIPLSVRERTSRFLAYGARRSFTQHMRFFRNQRTNRPFLNLPGEWARQSNHKF
SVSRDTFARDAYMMLRKCSDARFPISVEFKGDVGVGQGPTAQFYTLLATEVSKCCTKLWR
MDGDKASNRNNTAAVTNSSLAVVTRTDSLMAASPPTSLPRRTSSITPTHSPARASSIKNG
AAGTVNSRSFGATYTPPSSAKVSHAGSVDSAARSATLSPRPFMAGALDADAVLVPPPEGF
YPRRMDGVRWYVEDVESFSTTPLRCCSSDRFLGDSVTAHALHRSCSEQLGFSMTRRGLSF
IDHASTWGTDNNHHHSNNLSASAAHHNVNKRTVLVDRNAGLMRGYAMEQRERAKAYYAIG
AALGRVFVDEQVFPLPLSRAVVYFIRRGVPAYQSVLPIVKHTDPLPEFPIDLFELPLAAV
SWADQRLAQSLASLSTMDKATLAALDLYFTLPGDDNFELFPGGAQVKVTKENLRLYQRRV
VGAFLYESVAVPLYFLTMGFQDVVPHEALTALEVEELIGILCGEDKNPNDPLWTTDEIRS
VLVGDHGYQNDSPQLGLLAKVLGQRLTPAEQRDFLLFCTGCPRLPIGGIRALGAITVVRS
SNAFAEAHTEALQAEAGTSVGSSSGGAGLIHVEEGEVQSGSLGGLCKLSAQTNAEDTPSV
QPETPRCNASSLYSAVSEQPCDMPSTFEADLADSEWALPSVNTCFRYLKLPPYPSEDLLY
KKLLMSITQSGGNFELS
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atggacatcggcatctatgattccaaagcgcaggtgagggctgtcgtggcggagtggaag
gcaatgaacttcatcgggctcttcgaggctattgatgtcatgtccatctccctcgtaatg
ggattcgagaggtatttgcgcaagtttgattcagcagctgccatcccaatcctggttgac
gtgtgcaaaacgttcattaaggagaatacgcagggcgacctcatcgttgtatcactgcgt
gccctttcgctcatcatggagcacgttccatcgtcttacgaggcagcgcagtcattccac
gtctctctcgtggaaatctcatcgcaggcaatccaccgagcgctccgcacggagtggacg
tttgtgcagtcgaacaacaacgcgatgattgaggagggtctgcgtgtcatgcgcttcatc
agcaaggacgatatgacgggcgagctcatccaccgtgttcctctcggagacttgctcacg
ctgtgcacggactcccggccgttggtggcgcgacaggcgttagagacgctgctgatgatg
agttgcaaggtagtcatgccgtccgagctggagagcccgagtcgttctttcgcctccaat
atcttttccgtatcgaagtggaagaagttgttgcgcagcggcaccgatggtggcaagctt
ggccgcaagttctctttcaacagaggctcgtcaacgaaggcgaccgctaccgagggcacg
gtgccgtacgcagaccaccctgtagtgacacaggttgagaatgtcatctcaccgcttctt
gtctccctggtcgaacagtacgccaaatcactcgtgtcgattccagagcactggattctg
ctcgagctgtcgctgcaatgcctcggcacgctcattgagcgagcgctgatttgtcaccga
cctcacacagcccgtgcccttacctcgcccctgctgcccaagatactgtttcagctcatt
ctcgacacagagtcgaacgtcactctggagcccagcgttcgcatcgatcgcgtcctcctg
tgcgagaccaccttgacgctgctgacgagctgccaccgctacctgatgcttgagagcttg
cagctgccggaggcgcgccgcttcttccagctcattctggaggactcgacggacgagatt
accaccctcctcgacgaccctttcccgcgcgctgtcattgccacccgcagcacgcagaac
cgcgacaaggatcacatcacctccatcgctgctctgcagctcttcgtattagcctgtccg
acggtgccatcggatgcctttgggctgaagccgaagctggtgctgccggtacaccagtgg
atgtgggaggatgagatgcgccacaagaactgcatgatcgaggagcagtgcgtgttgctc
gagaggagctgggcgcgactcgatcaccacgcctgcatccctctccgcctaaagtctgcc
aacgtagacttgcgcaccatgacaatgtggaagggtcctaacggagtacaccgcaacatc
ttccgcgcctacatcccgtttgtgtaccacttcgcagatgaggcagcgttgcgacccatc
gttgccgtgaaggaggccgggccctgtgcggcggacggcactatgctcgtgtggaagctg
acgacgtcggaaacgcatgaccgccacgcgatggtcagcactataataacgaaagaggtg
aatagcgacacgggcagctcgagctcgacgaggcggggtcgcttcaaaggctctatcacg
tcgcgcacgttgtccgagaaagaatccacgaacgcgtcggcttctgtgctcccggcggtg
gtgctgaacacgcagctggaggtgccggaggatcacatctcgcttaccgaggagtacttt
acctccctgtgcatatttgcaaagaatacgtcggggcagatggcgaagcaggtagccacg
tgtgcgtgcgcgtcgatgctgcagctcatgtttctgtccggtgcctcggagcgctttgag
aagctgatgaccaaggcggtgctgcccatgtgcgagatgtgccgcgaggctctcatttcg
gcagacaaggcaaccaaggcgctcgctctgacgatgattggttggatgctgcaccacccg
atggccgaaccgtgcgagttcacgggaagtgctctgcgctgcggtttgctggaccagctg
gagatcctctccaagatggcgctgctcgtgcacgagaggcccacgcggaccgcgacgctt
gcagagaaggcgaacacactggcgggctgcatagtggaaaagattaagaatagccgcacc
ttacacatcggtggagacgcggaggtgaatgtgacgagcaacactactcttgatcgagct
tttttctcagaggctatgctgcgtgtgcagacggtgctggatgagctacagcggtgccag
tgtaaggccgccaaggacccggtggcgaccagcagcagcagtacgaccacaacagccgac
aaacaaggcagctctgcgtgtgtgagtaaggtagaactcgacacacacgagagtgcaatc
cgcgaactcctgcgtatcttccaagagtcgaacgacatcaccgcctacgaggtcttcaac
gctggggtagcctccacgctgctgtactatctccttggtgatcggacgttggaggacgtg
gctggggacacggtggtgtacgcctccggcgccgctgcctccaccttccagagcaaaact
gtctctctgcaaggtgtgcacatgggactgatagaccgaaacgcgtcgtcgtgggcggcg
atgatggccagtggcatgcatgtcgccgacatacttgccatgtatatggatgaaaagcgc
atggaatgctttatccagtgcgcggtagcctaccccactgggatgcgccggctagtgtcc
accctcacttcgaacctgtcgctgcagagctaccttccacttgttgagtcggtggtaacc
tacaacaaggtggtgtgcaagacgcctctgcaagcgcatgatgcgctagtcatgatctct
ccattaatcacactctgcggcgatgctggccagcgcatcttagccgccatcaaaaacacg
acaggtgatatttcaccgctgcctcacagcgacaactctgtaactgcggacggcttctcc
tcgacgccggctgcatcacacccgagaagggcagaaccgaagctgagaaagccggggttg
ctgtcgtcttcattggcacgcagcaaggcgattttgtcgcggaggaacgagccgcgcaat
gtcacgcggatcgcaaaggaatgctgcatggagggccaccgccttcaattcatcgagagc
tacaggcaggcgcacttctgcaacaagtgccaccgcaccatattcagtggacaccactgc
cgcacgtgcaactacaacgtgtgcgtgaactgctaccgtagctacactggcaatgtagag
ctgatccggtcactggcttcgatagagcggaaccatatacacctctgcgccactattggc
gatctggagcggtggtttcgcaccgggtccacctcaaccaaaggtactcagcaggccccg
gcttcgcagtcgacgctcaatcatctcgagcgcttcacaacgcgtgtcctcaccttcttg
aagcggtatacggaggttcgcaacacgcctgcagccacacccttcacacatgccagcggt
gcaacagccccaagcttcctttcctctgcaaacccgaccaccagtatcagtttttcagtg
gagcttgcgaagaagttgctaagtcacccgaatgttgtacgacgcctaacgtacaagtac
ctctcgcagttttcgatgcgtggggtgctgctggacgagggcgcaccgatcataccagcc
catgcgactgcccttgacgctgaggtgcagaaggtactgagcactgcggtggagaggcag
gcagctcattatatggtgcaggaagcagtggaggagcggtacatcttgtatcgcccttca
tgtggcatgctcccctttcacgagacggtgctaagcactctttaccgccgcgcctttgca
ctcggcgattatcaactgcttctgaagctggaaaattgtctgctgcggcttgacggcacc
gtggaggagccgctgacgctgcaggcgaacagcgccgtgacggtcgcgaatcctgctgcc
gtgtcaagcgggcgccacctgaatatgaagttcataaagaagtccaaatcggtcaagtcg
ccgcttgcaggaggtaggacctggtctttcagctcctcggcttcaataacggcagggaag
ccgatcaccgcgtccgaggagaagttggtggaggagcgcgagctcgagggcaacagtgct
gtaaagaacaagacctacatttttcaccacttcgagagtgactcggcagcatgctgcgct
tgcggcgcacactcccgcgccgagtttcacacggaggagccgccggcgctcatctttacg
gcacccgactttgctcaccgggccgatatgctgctgctcatcatgcttcatcgggtcctc
ttcgaggagactcatgggctgatcgcctatgccgcggaggccaaggacatttttggcggt
gatgacagcatcttcgagaacagcgctatcaccaacacattggtgcgctcgctggaagcg
tcggcgctgcgtgtgagcatgctgccgccactctacgcgctgccgcggtgggtgaacttt
gtgttgcgtgaggggcgctttctcatcccgctgtcagtgcgggagcggacgtcgcgcttt
ttggcttacggtgcacggcgctccttcacccagcacatgcgcttcttccgtaatcagcgc
accaaccggccattcttgaacttaccgggtgagtgggcgaggcagtcgaaccacaagttc
tccgtcagccgcgatacgttcgcgcgcgatgcatacatgatgctgcgcaagtgctctgac
gcgcggtttcctatctcggtggagttcaaaggcgacgttggcgtcggtcagggcccaacg
gcgcagttctacactctgctggcgacggaggtaagcaagtgctgcaccaagctgtggcgc
atggacggcgacaaagcaagcaaccgcaacaacaccgctgcggtgacaaactcgtcttta
gcggttgtgaccagaaccgactcgctgatggctgcttcgccgcctacatcgttgccgcgg
cgtaccagtagcatcacccctacgcactccccagctcgtgctagctccataaagaacggt
gccgctggcacagtgaactcacggagctttggcgccacttatacgccgccttcctcagct
aaggtttcgcacgcaggatcggtggacagtgctgctcgtagcgcaaccctcagcccgagg
ccgttcatggcgggtgcgctggacgctgacgcagtcctcgtaccaccaccggaaggcttt
tatccgcgccgcatggatggcgtgcgctggtacgtcgaagacgtagagagtttttccacg
acacctctacggtgctgcagcagtgatcgctttctcggtgacagcgtcacggcccacgcc
ttgcaccggagttgtagcgaacaactaggcttttcaatgactcgaagaggtctcagcttc
atcgatcacgcgtccacttgggggactgacaacaatcaccaccatagcaataacctcagt
gcctccgcggcccaccacaatgtgaacaagagaacggttttggtggaccgaaatgctggt
ttgatgcggggctacgccatggagcagcgggagcgtgccaaggcatactacgccatcggc
gccgcactcggccgtgtctttgtggatgagcaggtgtttccgcttccactgtcacgggcg
gtagtctactttattcgtcgaggcgtgccggcctaccagtccgtgctgcccatcgtgaag
cacactgacccactgccagagttcccgatcgacctattcgagctaccgttggcagcggtg
agctgggcggatcaacgtcttgcacagagcctggcgtccctgtcaaccatggataaggcc
accctcgctgcgctcgacctgtattttaccctccctggtgatgataacttcgagcttttc
cctggcggtgctcaggtaaaggtcaccaaggagaacttgcggctgtatcagcgccgtgtt
gttggagcgttcctgtacgagtccgtcgcggtgccgttgtacttcttgacgatgggcttt
caggacgttgtaccgcacgaggcgctcacagctctggaggtagaggagctgattggcatt
ctctgtggggaggacaagaacccaaatgaccccctatggacgacggacgagattcgctct
gtactggtgggtgaccacggctaccagaacgactcgccgcagctgggactactggcaaaa
gtgctcggacagcggctgactccagcagagcagcgcgacttcctgctcttctgcaccggc
tgccctcggctgcctattggcggtatccgcgctctcggtgccatcacggtagtacggagc
tctaacgcgtttgcggaggcgcatactgaggcattgcaggcggaggctggaacatcggtg
ggcagcagcagcggcggcgctggattgatccatgtggaggagggggaggttcaaagcggc
tcactgggtggcttgtgcaagctcagcgcgcagaccaacgcggaggacacgccgtctgta
caacctgagactccgcgctgcaacgcatcttccctctacagtgctgtatcagagcagccg
tgcgacatgccgtcaacctttgaggctgatctggccgactctgagtgggcgttgccatcg
gtgaacacatgcttccggtacttaaagctgccgccatacccgagcgaggatctgctatac
aagaagctgctgatgagcatcacgcaatccggcggcaactttgagctttcatag
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integrated database retrieval system
