Leishmania braziliensis: LBRM_35_4460
Help
Entry
LBRM_35_4460 CDS
T01113
Name
(RefSeq) conserved hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
lbz
Leishmania braziliensis
Pathway
lbz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LBRM_35_4460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbz03009
]
LBRM_35_4460
Ribosome biogenesis [BR:
lbz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LBRM_35_4460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
Utp21
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_HPS5
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_RIG_1st
PQQ_2
Beta-prop_NOL10_N
Utp12
TAF1C_beta-prop
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
5420041
NCBI-ProteinID:
XP_001569065
UniProt:
A4HPU0
A0A3P3ZJ27
LinkDB
All DBs
Position
36:1614412..1617375
Genome browser
AA seq
987 aa
AA seq
DB search
MQSFDPFRVVGSICGSVPVSPTLLYGTPVLMVATGRTFQLYKGKELAMMRGGPTFQDAVQ
AVAQAGKYRAVGEGPRLHVYVHHKPLWSSHHEAATKPNITLLLAQDDLLFSVGEDKRIVV
WELKTGTVLQEMLVEKSETVTCLALLTAYTNKLLLATAEGTLQLWNFRSGVCLWYSVRSC
SGSGSSTGQTSRATAGGVAAITALACSRYKDIIVYGTTEGKAVVCNVAADEVITTFDHGD
SGAVTSLLFRTDKDGLLVTGTSRGEVVVWDLENRCMDGTLTRSKQVRSELEALERPHVDV
VHSLVMFDLPEYTSLLVTGGADNALMQFRFDTVDGLGVLVRERRGHMGSCTDAIFYNTDL
LVTAGNDRALRVTHVFSDRASWELSQGKLGKRGRELNMGREAVKLPPAIALAASTTRNYQ
WSSLVSLHTASALACGWRMDSRAMEFKLSGIQTSAHTARALALSDCGNYAVVGYSSGNVA
VLSLQNRSVRHLFDAGLGADRAHDSSVECVEVACGNTVVVTAGLDGVIKMWDLWSGKLKA
TIPTGQPMTKSCLHESSSLFIVAQHFTIRVYHANPDAGLTEGELRVPVRELDGHNSPVTA
LALAPDTYRYVVSTSGDGALLIWDLAAAACVGQYRFVSPALSLSFHPDALFLVTTHAGER
GAYLWVNNIRYGYVPEVVLAPKANAVETLPWLHFPTAHGAAEGTSEGSANGGVPRTSASA
ALTEAEEEERAVAEAEEREAATTEACLFDASQDIALVRRRQIEAQQLALDAIATEGMQLA
GVPQRLWFNLTVLDQIKEKNQPLLPPKKKDVPFFLPTTQELRPTFLVLVSDNRKGDAENE
KGRVMRADMEALTRVQEMLVNAEHDALMDYFLSLKTAQAIDLELKRAVDYVNGSSYTATE
LARMQACVKGLLSFITAWLRRNQNVDLVQGILADVVRSHGALLTRFGDALVPALEELAEV
QNMMRYSLDHLVSYPACLAGTFSGTIF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcctttgacccgtttcgggtggtgggctccatctgcggatctgtcccggtgtcc
cccacgctgctctacggtacgccggtgctgatggtggccactggccgcacctttcagctg
tacaagggaaaggaactggcgatgatgcgcggaggtccgacgtttcaggacgcggtgcag
gcggtggcacaggccggcaagtaccgcgctgtcggggaggggccgcgcctgcacgtctac
gtgcaccacaagcccctctggtcgagccatcatgaagctgccacaaaaccgaacatcaca
ctcctgttggcccaggatgacctcctcttcagcgttggcgaggacaagcgtatcgtcgtg
tgggagcttaagacgggtacggtgctacaagagatgttggtggagaagagtgagacggtc
acgtgccttgcacttttgacagcgtacacgaacaagctgcttctcgcgacggcagaggga
acgctgcagctctggaacttccgctctggtgtctgcctgtggtactccgtgcgcagctgt
agcggcagtggtagtagcaccgggcagacatcacgcgccaccgctgggggtgtcgccgcc
atcacggcgctcgcttgtagtaggtacaaggacatcatcgtctacggcacaacggagggg
aaggctgttgtgtgcaacgtggcagcggatgaggtaatcaccactttcgaccatggcgac
agcggcgccgttacttcgctgctatttcgcacggacaaggacggcctgctggtgaccgga
acgagtcgtggggaggtagtcgtctgggacctcgaaaatcgatgcatggatggcaccttg
acccggtctaagcaagtgcggtcggagctggaggcactggaacgtcctcacgtcgacgtc
gtgcactcgctcgtcatgttcgacttacctgagtacacatcactgctcgtcacaggtggc
gctgacaacgccctcatgcaattccgttttgacaccgtggacggtcttggtgttttggtg
cgggagcgccgcgggcacatggggagctgcacagacgccatattttacaacacagacctt
cttgtcacggccggaaacgaccgagccctgcgtgtcacgcacgtcttttccgatcgggcc
tcatgggagttgtcgcagggcaagttgggcaagcgcgggcgcgagctgaacatggggcgg
gaagccgtgaagctgcctcctgccatcgcgcttgccgcctcgaccacgcgcaactaccag
tggtcgagtcttgtgtcgctacacaccgcatctgcgctggcatgcggctggcgcatggat
agccgcgcgatggagtttaagctatccggcatccaaacttccgcccacaccgcccgtgcg
ctggcgctgtcggactgcggcaactacgccgtcgtcgggtactccagtggaaacgtcgcc
gttttgagcctgcagaaccgcagtgtgcgccacctgttcgacgccggtcttggtgccgat
cgagctcatgacagctcggtagaatgcgtagaagtggcatgcggcaataccgtcgtcgtg
acggccgggctggacggtgtgatcaagatgtgggacctgtggagtggcaagttgaaggca
actattcctaccggccagccaatgaccaagtcgtgtctgcacgagtcgtcatcgctcttt
attgtagctcaacactttaccattcgcgtctatcatgccaaccctgacgctggcctcacc
gagggggagttgcgcgtcccagtccgcgagctggacggccacaacagccctgttacggca
cttgcactggctcctgacacctaccgctacgtagtatcgacttccggagatggtgcgcta
ctcatatgggacttggccgccgccgcctgtgtcgggcagtaccgcttcgtatcgcccgct
ttatccctcagttttcaccctgatgcgctcttcctcgtcaccacacacgccggtgagcgc
ggcgcgtatctgtgggtcaacaacatccgctatgggtacgtgccggaggtggtcctggct
ccgaaggcgaacgcggtggagacgctgccgtggctgcacttccccactgcgcacggggca
gctgaggggactagcgagggcagtgcaaacggaggcgtgccgcgcacgtctgcaagcgcg
gcactcacggaggcggaggaagaagagcgcgcggtcgctgaggcagaggagcgggaggca
gccaccaccgaggcatgcttgtttgatgcatcgcaggacattgccctggtacgccgtcga
cagatagaggcacagcagttggcgctcgatgcaatcgcgacagaagggatgcagctcgct
ggcgtgccgcagcgcctttggtttaacctcactgttctggaccagatcaaggagaagaac
caacctctgctcccgcccaagaaaaaagatgtgcccttctttttgcccaccacacaggag
ctgcggcccacttttctggtcctggtgtctgataaccgtaagggcgatgccgagaacgag
aaggggcgggttatgcgtgctgacatggaggcgctgacgcgggtgcaggagatgctcgtg
aacgcggaacacgatgccctcatggactactttttgtcgctcaaaacggctcaagcgatc
gacctggagctgaagcgcgcggtggactacgtgaacggcagcagctacacagctactgag
ctggcgaggatgcaagcatgcgtgaagggtttgttgtctttcataacggcgtggttgcga
cgcaaccaaaatgtcgacttggtgcaaggcatccttgcggatgtggttcgctcgcatgga
gcgttgctgactcgttttggggatgcgctcgtgccggcgctggaggagctggcggaggtg
cagaacatgatgcgctactctctagatcacctcgtgtcgtacccagcctgcctcgcgggg
accttctctggcaccatcttttaa
DBGET
integrated database retrieval system