KEGG   Leishmania braziliensis: LBRM_35_4460
Entry
LBRM_35_4460      CDS       T01113                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
lbz  Leishmania braziliensis
Pathway
lbz03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lbz00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LBRM_35_4460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lbz03009]
    LBRM_35_4460
Ribosome biogenesis [BR:lbz03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    LBRM_35_4460
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st Utp21 WD40 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_LRRK2 Beta-prop_DCAF4 Beta-prop_HPS5 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_RIG_1st PQQ_2 Beta-prop_NOL10_N Utp12 TAF1C_beta-prop PALB2_WD40
Other DBs
NCBI-GeneID: 5420041
NCBI-ProteinID: XP_001569065
UniProt: A4HPU0 A0A3P3ZJ27
LinkDB
Position
36:1614412..1617375
AA seq 987 aa
MQSFDPFRVVGSICGSVPVSPTLLYGTPVLMVATGRTFQLYKGKELAMMRGGPTFQDAVQ
AVAQAGKYRAVGEGPRLHVYVHHKPLWSSHHEAATKPNITLLLAQDDLLFSVGEDKRIVV
WELKTGTVLQEMLVEKSETVTCLALLTAYTNKLLLATAEGTLQLWNFRSGVCLWYSVRSC
SGSGSSTGQTSRATAGGVAAITALACSRYKDIIVYGTTEGKAVVCNVAADEVITTFDHGD
SGAVTSLLFRTDKDGLLVTGTSRGEVVVWDLENRCMDGTLTRSKQVRSELEALERPHVDV
VHSLVMFDLPEYTSLLVTGGADNALMQFRFDTVDGLGVLVRERRGHMGSCTDAIFYNTDL
LVTAGNDRALRVTHVFSDRASWELSQGKLGKRGRELNMGREAVKLPPAIALAASTTRNYQ
WSSLVSLHTASALACGWRMDSRAMEFKLSGIQTSAHTARALALSDCGNYAVVGYSSGNVA
VLSLQNRSVRHLFDAGLGADRAHDSSVECVEVACGNTVVVTAGLDGVIKMWDLWSGKLKA
TIPTGQPMTKSCLHESSSLFIVAQHFTIRVYHANPDAGLTEGELRVPVRELDGHNSPVTA
LALAPDTYRYVVSTSGDGALLIWDLAAAACVGQYRFVSPALSLSFHPDALFLVTTHAGER
GAYLWVNNIRYGYVPEVVLAPKANAVETLPWLHFPTAHGAAEGTSEGSANGGVPRTSASA
ALTEAEEEERAVAEAEEREAATTEACLFDASQDIALVRRRQIEAQQLALDAIATEGMQLA
GVPQRLWFNLTVLDQIKEKNQPLLPPKKKDVPFFLPTTQELRPTFLVLVSDNRKGDAENE
KGRVMRADMEALTRVQEMLVNAEHDALMDYFLSLKTAQAIDLELKRAVDYVNGSSYTATE
LARMQACVKGLLSFITAWLRRNQNVDLVQGILADVVRSHGALLTRFGDALVPALEELAEV
QNMMRYSLDHLVSYPACLAGTFSGTIF
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgcaatcctttgacccgtttcgggtggtgggctccatctgcggatctgtcccggtgtcc
cccacgctgctctacggtacgccggtgctgatggtggccactggccgcacctttcagctg
tacaagggaaaggaactggcgatgatgcgcggaggtccgacgtttcaggacgcggtgcag
gcggtggcacaggccggcaagtaccgcgctgtcggggaggggccgcgcctgcacgtctac
gtgcaccacaagcccctctggtcgagccatcatgaagctgccacaaaaccgaacatcaca
ctcctgttggcccaggatgacctcctcttcagcgttggcgaggacaagcgtatcgtcgtg
tgggagcttaagacgggtacggtgctacaagagatgttggtggagaagagtgagacggtc
acgtgccttgcacttttgacagcgtacacgaacaagctgcttctcgcgacggcagaggga
acgctgcagctctggaacttccgctctggtgtctgcctgtggtactccgtgcgcagctgt
agcggcagtggtagtagcaccgggcagacatcacgcgccaccgctgggggtgtcgccgcc
atcacggcgctcgcttgtagtaggtacaaggacatcatcgtctacggcacaacggagggg
aaggctgttgtgtgcaacgtggcagcggatgaggtaatcaccactttcgaccatggcgac
agcggcgccgttacttcgctgctatttcgcacggacaaggacggcctgctggtgaccgga
acgagtcgtggggaggtagtcgtctgggacctcgaaaatcgatgcatggatggcaccttg
acccggtctaagcaagtgcggtcggagctggaggcactggaacgtcctcacgtcgacgtc
gtgcactcgctcgtcatgttcgacttacctgagtacacatcactgctcgtcacaggtggc
gctgacaacgccctcatgcaattccgttttgacaccgtggacggtcttggtgttttggtg
cgggagcgccgcgggcacatggggagctgcacagacgccatattttacaacacagacctt
cttgtcacggccggaaacgaccgagccctgcgtgtcacgcacgtcttttccgatcgggcc
tcatgggagttgtcgcagggcaagttgggcaagcgcgggcgcgagctgaacatggggcgg
gaagccgtgaagctgcctcctgccatcgcgcttgccgcctcgaccacgcgcaactaccag
tggtcgagtcttgtgtcgctacacaccgcatctgcgctggcatgcggctggcgcatggat
agccgcgcgatggagtttaagctatccggcatccaaacttccgcccacaccgcccgtgcg
ctggcgctgtcggactgcggcaactacgccgtcgtcgggtactccagtggaaacgtcgcc
gttttgagcctgcagaaccgcagtgtgcgccacctgttcgacgccggtcttggtgccgat
cgagctcatgacagctcggtagaatgcgtagaagtggcatgcggcaataccgtcgtcgtg
acggccgggctggacggtgtgatcaagatgtgggacctgtggagtggcaagttgaaggca
actattcctaccggccagccaatgaccaagtcgtgtctgcacgagtcgtcatcgctcttt
attgtagctcaacactttaccattcgcgtctatcatgccaaccctgacgctggcctcacc
gagggggagttgcgcgtcccagtccgcgagctggacggccacaacagccctgttacggca
cttgcactggctcctgacacctaccgctacgtagtatcgacttccggagatggtgcgcta
ctcatatgggacttggccgccgccgcctgtgtcgggcagtaccgcttcgtatcgcccgct
ttatccctcagttttcaccctgatgcgctcttcctcgtcaccacacacgccggtgagcgc
ggcgcgtatctgtgggtcaacaacatccgctatgggtacgtgccggaggtggtcctggct
ccgaaggcgaacgcggtggagacgctgccgtggctgcacttccccactgcgcacggggca
gctgaggggactagcgagggcagtgcaaacggaggcgtgccgcgcacgtctgcaagcgcg
gcactcacggaggcggaggaagaagagcgcgcggtcgctgaggcagaggagcgggaggca
gccaccaccgaggcatgcttgtttgatgcatcgcaggacattgccctggtacgccgtcga
cagatagaggcacagcagttggcgctcgatgcaatcgcgacagaagggatgcagctcgct
ggcgtgccgcagcgcctttggtttaacctcactgttctggaccagatcaaggagaagaac
caacctctgctcccgcccaagaaaaaagatgtgcccttctttttgcccaccacacaggag
ctgcggcccacttttctggtcctggtgtctgataaccgtaagggcgatgccgagaacgag
aaggggcgggttatgcgtgctgacatggaggcgctgacgcgggtgcaggagatgctcgtg
aacgcggaacacgatgccctcatggactactttttgtcgctcaaaacggctcaagcgatc
gacctggagctgaagcgcgcggtggactacgtgaacggcagcagctacacagctactgag
ctggcgaggatgcaagcatgcgtgaagggtttgttgtctttcataacggcgtggttgcga
cgcaaccaaaatgtcgacttggtgcaaggcatccttgcggatgtggttcgctcgcatgga
gcgttgctgactcgttttggggatgcgctcgtgccggcgctggaggagctggcggaggtg
cagaacatgatgcgctactctctagatcacctcgtgtcgtacccagcctgcctcgcgggg
accttctctggcaccatcttttaa

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