Lacticaseibacillus paracasei ATCC 334: LSEI_0408
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Entry
LSEI_0408 CDS
T00407
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease component
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Pathway
lca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LSEI_0408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lca02000
]
LSEI_0408
Transporters [BR:
lca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LSEI_0408
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_19
AAA_30
DUF87
SMC_N
SRP54
AAA_16
DO-GTPase2
AAA_22
AAA_29
NB-ARC
AAA_23
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABJ69264
UniProt:
Q03C08
LinkDB
All DBs
Position
complement(411844..413469)
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AA seq
541 aa
AA seq
DB search
MLDLQQPTLMASIVDVGLAKKDMTYVWHTAILMAVIAIAAFALGAICNAFSSCAALKMGQ
NLRTHLLAISLADRDPQALKPETLITRITNDVTQMQTLVSMLTRGLVRSPMLLFGGIVMS
IIVSPRLSWIILIALPILAIYIYVIVRRSLPLYTAMQGQVDVMNRIMSENLTGAKTIKAY
VLEDHQLTQFNTENRNLQTISQRAVLATVTLAPLIMLVLNLAVVAALAYGGNLAISRTIT
TGEIMAFVNYMIQITTAMTNTVNLITTFSRAITSSARVNAVLAEEAGTEASGTLPAPADS
TIQFEHVNFGFSQSRPILDDINLTVPSGQWLGIIGSTGSGKTTLIALLTRLYEHYQGKIT
VGGTDIQQITLPALHKKITVALQDSLLFSGTVAHNLSYGAPQATPTQLASGVAIAEATEF
VGTNYDAPVEEAGKNFSGGQRQRLNLARAIIPDPDILVMDDATSAVDQETNTEIQDALVK
ARRNRTTIIISQRVPNIMDCDQIIVMQNGQITARGTHTELVKSSPFYAQLVQTQLGGDYI
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgacctgcaacaaccgaccttgatggctagcatcgtggacgtgggattagctaag
aaagatatgacttatgtttggcataccgctattctcatggcagtgattgctattgctgcg
ttcgctttaggtgctatctgtaacgccttctcctcctgtgcagccttgaaaatgggccaa
aacctgcggactcatctgctggctatttcactggccgatcgcgatccccaagcactcaaa
cccgaaacactcatcacccgcatcacaaacgatgttacgcaaatgcagacgctggtaagc
atgctgacgcgcggactcgtccgctcgcctatgctgctatttggcggcattgttatgtcg
attattgtgtcgccgcggctgtcatggatcattttgattgccttgcctattcttgccatc
tacatctacgtcatcgtgcgccggtcgctgccactttacacggcgatgcaaggacaagtt
gacgtcatgaaccggattatgagtgaaaacttgactggcgccaaaacgatcaaggcgtac
gtactggaagaccaccaactgactcaattcaacactgaaaatcgcaacctgcaaacgatt
agtcagcgtgccgtcttggcaacagtcactttggcgccactgatcatgctggtacttaat
ctggcagtcgttgccgcgctagcttatggcggtaatctagccatcagccgcaccatcacc
actggcgaaatcatggcgttcgtcaattacatgattcaaattacgacggcgatgaccaat
accgttaacctcatcacgaccttttcgcgggcgatcacttctagtgcacgcgtcaacgcc
gttttggccgaagaagcaggcactgaggccagtgggacattacctgccccagctgatagt
accatccagtttgagcacgtgaactttgggttttcgcaaagtcggccaatccttgacgat
atcaatctgaccgtgccaagtgggcagtggttgggcattatcggttctactggttccggc
aaaaccacgctgatcgccttattaacccgactttatgagcattatcaagggaaaatcacg
gtcggtggcaccgatatccaacaaattaccttaccggctttacacaaaaagatcacggtc
gccttacaggactcactgcttttttctggaactgtcgcgcataatctgagttatggcgcg
ccgcaagccacgccgacacaattagccagcggcgttgctatcgctgaggcaactgagttt
gtcgggactaattatgatgcccccgtcgaagaagctgggaaaaacttttctggcggtcaa
cggcaacgtctgaatcttgcccgcgccatcatccccgatcctgatattctggtcatggat
gacgctaccagtgctgtggatcaggaaaccaacactgagattcaagatgccttggttaag
gcccgccgcaaccgtacaaccatcatcatttcgcaacgcgtcccgaacatcatggactgt
gatcaaatcatcgtcatgcaaaacgggcaaattacggctcgcggaacgcataccgagttg
gtcaaaagttcgccattttacgcgcaactggttcaaacccaactgggaggtgactacatt
gattaa
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