Lacticaseibacillus paracasei ATCC 334: LSEI_0639
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Entry
LSEI_0639 CDS
T00407
Name
(GenBank) ATPase component of ABC transporter with duplicated ATPase domains
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Pathway
lca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LSEI_0639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lca02000
]
LSEI_0639
01504 Antimicrobial resistance genes [BR:
lca01504
]
LSEI_0639
Transporters [BR:
lca02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LSEI_0639
Antimicrobial resistance genes [BR:
lca01504
]
Gene variants
Macrolide resistance genes
Transporters
LSEI_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_15
Dynamin_N
AAA_23
AAA_22
AAA_16
NACHT
AAA_28
MMR_HSR1
AAA_18
TsaE
FtsK_SpoIIIE
AAA_30
nSTAND6
AAA_33
ABC_tran_Xtn
nSTAND3
ORC-CDC6-like
NB-ARC
ATP-synt_ab
MobB
RNA_helicase
RsgA_GTPase
Zeta_toxin
AAA
Pox_A32
Roc
DO-GTPase2
DUF87
AAA_7
YobI-ATPase
DUF815
SRPRB
MeaB
PRK
DUF5615
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABJ69480
UniProt:
Q03BE2
LinkDB
All DBs
Position
complement(636091..637572)
Genome browser
AA seq
493 aa
AA seq
DB search
MSTIQIKQLNFAYDGQAPLFTNTTLDLDTNWHLGLVGRNGRGKTTLLRILQQALPYSGTV
TVPLQLQYFPQTLDETQLTLTAAQAITDVAQWQLERELNLLHADPNILWRPFVDLSGGEQ
TKVRLALLFIQDNGVALIDEPTNHLDLRSRRQVAAYLQQKPGFIVVSHDRDFLDSITDHT
LAIQRQQITLYQGNFSTFMTEKERQDQTELAKNGQLKTEITRLKRTTHDKKVWAENKEKS
IYGNPHIKDSGHNAGRGFISARAARTMKKSKNLEHRMTKEIDEKESLLKNLEKVDPLTML
PVSTHHHQLVVAEKVQVGFDQPLFQPISFTLTRGDRIAIVGDNGSGKSTLIRALLKQFTG
MQSGHLTLAPVSLSLVRQQYTDNRGTLVDFAKQHQLSRETLLNNLRKLGMPRADFNTSIE
HLSMGQQKKVELARSLATPGALYVWDEPLNYLDTYNQDQLVAAIKHYQPTMLFVEHDEHF
IEQVATKIIRLQP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgattcaaattaaacagctcaattttgcttatgacggtcaagcaccgcttttt
acgaacacaacccttgaccttgataccaactggcatctcggattggtcggtcgcaacggc
cgaggcaaaaccactttgttgcgaattttacaacaagcactaccctacagtggcacggtg
actgttcccttgcagttgcaatattttcctcaaacgctggatgaaacccaactgacgctg
actgccgcacaagccatcaccgatgttgcgcaatggcaactcgaacgtgaactaaatctg
ctccacgctgatcctaacattctctggcgcccatttgtcgatttatctggtggtgagcaa
acaaaagtgcgtctcgccttactgttcattcaagacaatggtgtcgcactcattgacgag
ccaaccaatcacctcgacctgcgcagccgccgacaagtcgccgcctatctccaacaaaaa
cccggctttattgtcgtcagccatgatcgtgattttttggacagcatcaccgaccacacg
ctagcaatccagcggcagcaaatcaccctttatcaaggcaatttctccaccttcatgacc
gaaaaagagcggcaagatcaaactgaactggccaaaaatggtcaacttaaaactgaaatt
acccgacttaaacgaacgactcatgataaaaaagtttgggcggaaaataaagaaaagagt
atctatggtaatccgcacatcaaggacagcggtcataatgctggtcgcgggtttattagc
gctcgagctgcacggacgatgaaaaaaagtaaaaatctcgaacaccggatgaccaaagaa
atcgatgagaaggaaagtcttctaaagaacctagaaaaggttgatccactcaccatgctg
ccggtgtcgacccatcaccatcaacttgtggtcgctgaaaaggtccaagtcggattcgat
caaccgcttttccagccgatctcttttactttgacccgcggcgatcggattgccattgtt
ggtgacaatggcagcggcaagtcgaccttgatccgcgccttgctgaagcagttcaccggc
atgcagtcagggcatctcaccttggcacccgtcagtcttagccttgttcgccaacaatac
accgataaccgcggtacattagtcgactttgccaaacagcaccagcttagccgtgaaacc
ttgcttaacaacttgcgcaaactcggcatgccgcgagccgactttaacacgtcgattgag
catctgagcatgggccaacagaaaaaagtcgaactagcgcgatccctagccaccccggga
gctttgtacgtttgggacgagccgctcaattatttggacacttacaaccaagaccagctg
gtcgccgccatcaagcattatcaaccgacgatgctttttgtcgagcacgatgagcatttt
atcgagcaagttgcgacaaaaatcattcgcctgcaaccatga
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