Lacticaseibacillus paracasei ATCC 334: LSEI_1001
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Entry
LSEI_1001 CDS
T00407
Name
(GenBank) DNA polymerase III, epsilon subunit related 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Pathway
lca03030
DNA replication
lca03430
Mismatch repair
lca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSEI_1001
03430 Mismatch repair
LSEI_1001
03440 Homologous recombination
LSEI_1001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lca03032
]
LSEI_1001
03400 DNA repair and recombination proteins [BR:
lca03400
]
LSEI_1001
Enzymes [BR:
lca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSEI_1001
DNA replication proteins [BR:
lca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSEI_1001
DNA repair and recombination proteins [BR:
lca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSEI_1001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ABJ69797
UniProt:
Q03AH5
LinkDB
All DBs
Position
complement(985570..986112)
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AA seq
180 aa
AA seq
DB search
MDFIAMDFETANRKRASACSLALVVVQQNKVVDSFYTLINPQMQFDAQNIHIHGITPEMV
QDQPTFDQVWPHIQMFYTPGRIVTAHNAPFDVSVMRLTLDRYGIAAPRYQVIDTVKTSRQ
FLPKLPNHRLDTVSAALHIPLEHHHNALADSYACARILIAENEHFGEARIKSMMKLSKAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggactttatcgccatggatttcgaaaccgccaatcgcaagcgagcctcagcgtgttca
ttggcgctcgtggtcgtccagcaaaataaagtggttgacagtttttacacccttattaat
ccgcagatgcagtttgatgcccaaaacattcacattcatggcatcacccctgaaatggtt
caagatcagccaacatttgatcaagtttggccgcatattcaaatgttctatacgccaggt
cggatcgtgaccgctcacaatgcaccgtttgatgtttcggttatgcgactgacactggat
cgttacggcattgcggcgccgcgctaccaggtgattgacacggttaaaacctcgcgacaa
tttttgccgaagttgccgaatcatcggttagatactgtcagtgccgccttacacattccg
cttgagcatcaccacaatgccttagcggatagttatgcctgtgctcggattttgatcgcc
gaaaatgagcactttggcgaagcgcggattaaaagcatgatgaagctttcaaaagcgggt
tga
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