Lacticaseibacillus paracasei ATCC 334: LSEI_1054
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Entry
LSEI_1054 CDS
T00407
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Pathway
lca03420
Nucleotide excision repair
lca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSEI_1054
03430 Mismatch repair
LSEI_1054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lca03400
]
LSEI_1054
Enzymes [BR:
lca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSEI_1054
DNA repair and recombination proteins [BR:
lca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSEI_1054
MMR (mismatch excision repair)
Other MMR factors
LSEI_1054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABJ69848
UniProt:
Q03AC4
LinkDB
All DBs
Position
1035001..1037256
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AA seq
751 aa
AA seq
DB search
MVMDAALKGMNDKQSEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKHVNPWNILAI
TFTNKAAREMRERVGKLVDAEIARDIWVSTFHALCVRILRRDIDKLGYNRAFTIADPAEQ
LTLVKHILADFNLDPKRYDPKSILGAISSAKNELVDPQTYANEQANSPFTKVVAQVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDKETLAFYQRKFRYIHVDEYQDTNEAQYQLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKQDYPKAQVILLEQNYRSTKTILSAANDVI
QNNQNRQAKTLWTENREGDKITYYRAQSETDEAIFVIRRIEAEIADNHRKYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPEDDMSFNRIVNEPKR
GIGNTSVEKLEAFANEHDWSLLEAAANAELSPIAGKARGQLAKFGKMIQQLGTRRKDLNV
TKMMQAILEDSGYLSTLRAAHNLEADTRIENLEELLSVTQGFDSRYQPENEDSDIFVDFL
AELALLSDQDDVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRASMDESELEEE
RRLAYVGITRAKQKLYLSNAYGRMLYGQRQNNPASRFIEEINPDLLEVIGTTQPKSDIPF
INRTDRAFSSPYSRHAAQKTATPVTVQAAPTTGAGKTSWEAGDKVKHRKWGTGTVVKVTG
TGDDQELDIAFKDNGIKRLLAAFAPIVKVAS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggatgccgcattaaagggtatgaatgataagcaatctgaggcggtgttggcg
actgaagggccagtgctgattatggctggtgccggttcaggcaagacacgggtattgact
catcggattgcttatttagttgaagaaaagcacgtcaatccatggaacatccttgccatc
acgtttacaaataaggccgcccgtgagatgcgcgagcgagtcggcaagttggttgatgct
gagattgcgcgcgatatttgggtctcaacgttccatgcgctctgtgtccgaattttacga
cgcgacattgacaagctgggctataaccgtgcctttacgattgctgatcctgctgagcaa
ctgacgctagtgaagcatattttggctgatttcaatcttgatccaaagcgctacgatcct
aaatccattttaggtgctatttcgagcgctaaaaatgaactcgtggatccacaaacttat
gccaatgaacaggctaacagtcctttcaccaaagttgtggcgcaggtttatgcggaatat
caaaagcgtctgcgcagtgatcaggcattggactttgatgatctcatcatgcagaccatc
gtgctttttgaaaaagacaaagaaacattggcattctaccagcgtaagttccgctacatt
catgttgacgaatatcaggacactaacgaagcgcaataccagctcgtgcatatgttggca
gaaggctaccataatttatgtgtggttggtgatgccgaccagagcatttatggctggcgt
ggtgccaatatgcagaatattttggatttcaaacaagactatccaaaggcgcaagtcatt
ttgcttgagcagaattatcggtcaactaaaactattttgagtgcggccaatgatgtgatt
cagaacaatcagaatcgccaagccaaaacgttatggacggaaaatcgcgaaggcgacaag
attacctattaccgcgctcaaagcgaaactgatgaagctatttttgtcattcgccgaatt
gaagcagagatcgctgataatcatcgcaaatatggtgattttgcgattttgtaccgaacc
aatgcgcagtcgcgggcgattgaagaagcgtttgtgaagtccaatattccatataaaatg
gttggcgggcataagttctatgatcgcaaggaaattcgcgatgcgctagcgtatttccga
ttagtggtcaatccggaagacgatatgagttttaatcgaattgtcaatgaaccaaaacgc
ggtattggcaacacaagcgttgagaagttagaggcctttgccaatgagcatgactggtcc
ttgctggaagcagcggcgaatgctgaactcagtccgattgctggtaaagctcgcggacag
ttagctaagttcggtaaaatgatccagcagctgggtacacggcgaaaagatctaaacgtg
accaagatgatgcaggcaattcttgaggatagtggctatttatcaacactgcgagcggct
cacaatctggaagccgatacccgcatcgaaaacttagaagaattgctttcggtgacccaa
ggattcgattcccggtatcagccggaaaatgaagacagcgacattttcgttgattttctg
gctgaactggcgctgttatcggatcaggatgacgttgaagaagatgcacaagaagttacc
ttgatgaccttgcacgctgctaaaggactggaatttccggttgtctttttagtggggatg
gaagaaggactctttccattaagtcgggcttccatggatgaaagcgagctcgaagaggaa
cggcgcttagcttatgtcggcattacccgcgccaaacagaagctgtatctgtccaatgcc
tatggccggatgctgtatggtcaacggcaaaacaatcctgctagccgtttcattgaagaa
attaatcctgacttgttggaagtcattggcactacccagccaaaaagtgacattccattt
attaatcgtactgatcgcgcattcagctcgccgtatagccgccacgctgctcaaaaaaca
gcaacacccgttactgtgcaagccgcgccaacaacaggtgcaggcaaaaccagttgggaa
gctggcgacaaggtgaagcatcgcaagtgggggactggtaccgtggtgaaagtcacgggt
accggcgatgatcaagaactcgatattgcttttaaagacaacggcatcaaacgactgcta
gctgcctttgctccaattgtcaaagtggcatcataa
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